Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.6e-45 185.7 91 100.0
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.6e-45 185.7 91 100.0
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 6.2e-37 157.1 91 83.5
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 3.1e-36 154.8 91 83.5
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 2.0e-35 152.1 91 79.1
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.6e-35 151.8 89 80.9
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 3.4e-35 151.4 89 78.7
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 3.8e-34 147.9 91 78.0
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 6.4e-34 147.1 87 80.5
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.4e-33 145.2 91 75.8
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 4.2e-33 144.4 87 77.0
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 4.2e-33 144.4 91 79.1
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.5e-33 144.1 87 77.0
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 7.1e-33 143.7 90 73.3
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 7.1e-33 143.7 90 73.3
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 7.1e-33 143.7 91 75.8
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 9.3e-33 143.3 90 73.3
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.2e-32 142.9 86 79.1
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.2e-32 142.9 90 72.2
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.2e-32 142.9 90 72.2
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.6e-32 142.5 87 75.9
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.6e-32 142.5 91 75.8
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.1e-32 142.1 91 74.7
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 4.6e-32 141.0 91 74.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 4.6e-32 141.0 91 73.6
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.6e-32 141.0 91 75.8
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 7.9e-32 140.2 85 78.8
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.0e-31 139.8 91 70.3
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.8e-31 139.0 87 74.7
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.3e-31 138.7 91 76.9
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 3.9e-31 137.9 87 71.3
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 8.7e-31 136.7 89 75.3
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 1.5e-30 136.0 87 74.7
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.5e-30 135.2 87 74.7
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 2.5e-30 135.2 89 74.2
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.3e-30 134.8 90 74.4
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 3.3e-30 134.8 90 68.9
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 4.3e-30 134.4 90 68.9
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 5.6e-30 134.0 87 74.7
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 5.6e-30 134.0 84 75.0
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 5.6e-30 134.0 87 71.3
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 9.6e-30 133.3 87 74.7
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.6e-29 132.5 89 73.0
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 2.1e-29 132.1 88 72.7
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 3.7e-29 131.3 83 74.7
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 3.7e-29 131.3 90 67.8
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 6.2e-29 130.6 86 72.1
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.1e-28 129.8 91 70.3
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.8e-28 129.0 86 70.9
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.8e-28 129.0 86 72.1
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 3.1e-28 128.3 87 66.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 6.9e-28 127.1 80 76.2
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.2e-27 126.3 91 68.1
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.5e-27 125.9 86 68.6
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.5e-27 125.9 90 67.8
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.6e-27 125.2 91 67.0
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 2.6e-27 125.2 84 69.0
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 3.4e-27 124.8 86 66.3
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 7.6e-27 123.6 104 61.5
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.0e-26 123.2 87 66.7
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.9e-26 121.7 89 65.2
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 3.8e-26 121.3 84 66.7
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 3.8e-26 121.3 84 66.7
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 3.8e-26 121.3 92 68.5
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 4.9e-26 120.9 88 62.5
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 6.5e-26 120.6 87 64.4
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 1.1e-25 119.8 84 66.7
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.1e-25 119.8 84 66.7
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 1.1e-25 119.8 84 66.7
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.1e-25 119.8 85 68.2
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.1e-25 119.8 110 59.1
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.4e-25 119.4 88 69.3
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.9e-25 119.0 87 62.1
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 2.5e-25 118.6 86 61.6
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 3.2e-25 118.2 89 62.9
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 3.2e-25 118.2 85 65.9
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 3.2e-25 118.2 84 63.1
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 4.2e-25 117.9 84 70.2
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.6e-24 115.9 84 63.1
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.7e-24 115.2 84 61.9
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.0e-23 113.2 85 64.7
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.3e-23 112.8 76 69.7
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 5.7e-22 107.5 61 78.7
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.8e-20 102.4 89 52.8
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.4e-17 92.8 86 52.3
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 1.8e-15 85.9 64 70.3
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.5e-14 82.0 88 46.6
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.6e-11 72.0 84 46.4


User provided reference genes

Program Settings