Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009725 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D112881 6.0e-64 247.3 120 100.0
CSS0004673 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110129 1.4e-47 193.0 111 86.5
CSS0004850 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110813 1.4e-41 172.9 112 79.5
CSS0022451 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109420 2.5e-41 172.2 112 77.7
CSS0049972 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110748 2.2e-34 149.1 112 70.5
CSS0002883 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D113081 5.5e-33 144.4 112 67.9
CSS0012379 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109788 8.2e-29 130.6 112 63.4
CSS0006669 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110459 2.7e-19 99.0 112 50.0
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 5.7e-14 81.3 154 36.4
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.3e-13 80.1 154 35.7
CSS0002408 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113319 1.9e-09 66.2 53 64.2
CSS0008263 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D109032 1.9e-09 66.2 53 64.2
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 5.5e-09 64.7 154 31.8
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 6.1e-08 61.2 110 39.1
CSS0045498 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113452 6.1e-08 61.2 73 49.3
CSS0019155 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113160 8.0e-08 60.8 53 62.3
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.0e-07 60.5 154 29.9
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.0e-07 60.5 154 29.2
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 2.3e-07 59.3 69 47.8
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 3.0e-07 58.9 96 34.4
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 3.0e-07 58.9 154 31.2
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 4.0e-07 58.5 96 34.4
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 5.2e-07 58.2 96 35.4
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 5.2e-07 58.2 154 30.5
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 6.8e-07 57.8 154 29.9
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 6.8e-07 57.8 96 34.4
CSS0013425 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D112516 8.9e-07 57.4 53 58.5
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 8.9e-07 57.4 96 33.3
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 8.9e-07 57.4 76 40.8
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 8.9e-07 57.4 155 27.7
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 1.2e-06 57.0 154 29.2
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 1.2e-06 57.0 154 28.6
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 2.0e-06 56.2 154 28.6
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 2.0e-06 56.2 154 29.9
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 3.4e-06 55.5 70 38.6
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 3.4e-06 55.5 55 49.1
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 5.7e-06 54.7 148 29.1
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 7.5e-06 54.3 151 26.5


User provided reference genes

Program Settings