Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.4e-103 377.1 200 100.0
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-91 339.7 200 89.0
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-90 334.0 204 87.3
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-89 332.8 201 86.6
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.2e-86 322.0 200 86.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-74 282.3 201 75.1
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.4e-72 275.4 201 74.6
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.8e-71 271.9 203 74.9
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-66 255.4 194 72.2
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-65 251.9 200 66.5
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.8e-58 228.4 202 67.8
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.1e-57 224.2 200 64.5
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-47 192.6 199 56.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-44 183.3 186 55.9
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-43 180.6 126 76.2
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-41 174.1 143 70.6
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.9e-38 163.3 112 71.4
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.0e-36 156.0 182 51.1
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 5.8e-27 125.2 183 45.9
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-24 117.1 199 44.2
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.3e-20 103.2 178 41.0
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 7.8e-16 88.2 154 40.3
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.3e-15 86.7 139 42.4
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 6.6e-15 85.1 116 42.2
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 8.6e-15 84.7 136 36.8
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 1.9e-14 83.6 136 37.5
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.5e-14 83.2 116 41.4
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 2.5e-14 83.2 130 38.5
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 7.3e-14 81.6 128 42.2
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 7.3e-14 81.6 127 40.9
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 1.6e-13 80.5 147 38.8
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.6e-13 80.5 128 37.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 6.2e-13 78.6 114 41.2
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.1e-12 77.8 136 35.3
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.1e-12 77.8 199 33.2
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.4e-12 77.4 125 37.6
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.4e-12 77.4 199 32.2
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.4e-12 77.4 199 32.2
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 1.8e-12 77.0 136 34.6
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 2.0e-11 73.6 102 40.2
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 4.4e-11 72.4 136 36.8
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 5.8e-11 72.0 136 36.8
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 7.6e-11 71.6 119 36.1
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 1.7e-10 70.5 111 39.6
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 1.7e-10 70.5 136 36.0
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.8e-10 69.3 106 38.7
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.8e-10 69.3 195 29.7
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 4.9e-10 68.9 136 35.3
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.4e-10 68.6 119 36.1
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 8.4e-10 68.2 116 35.3
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.1e-09 67.8 118 34.7
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 1.1e-09 67.8 101 39.6
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.1e-09 67.8 117 36.8
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.9e-09 67.0 126 39.7
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.1e-09 65.9 134 32.8
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 5.4e-09 65.5 150 32.7
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 9.2e-09 64.7 124 37.1
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.2e-08 64.3 131 35.9
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.2e-08 64.3 131 35.1
PGSC0003DMG400006632 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.6e-08 63.9 144 34.7
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 1.6e-08 63.9 132 33.3
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 2.7e-08 63.2 109 40.4
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.7e-08 63.2 124 33.9
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 3.5e-08 62.8 129 36.4
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 4.6e-08 62.4 130 37.7
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.6e-08 62.4 135 36.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.0e-08 62.0 126 34.9
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.3e-07 60.1 107 35.5
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 3.0e-07 59.7 109 38.5
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.0e-07 59.7 117 33.3
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 3.9e-07 59.3 121 34.7
DCAR_027026 Daucus carota HOM05D014660 ORTHO05D016977 3.9e-07 59.3 119 33.6
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 5.1e-07 58.9 133 30.8
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 6.6e-07 58.5 146 33.6
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 6.6e-07 58.5 121 29.8
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.6e-07 58.5 106 34.9
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 6.6e-07 58.5 102 35.3
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 6.6e-07 58.5 102 35.3
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-06 57.8 116 32.8
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.1e-06 57.8 126 31.7
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.1e-06 57.8 108 31.5
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.5e-06 57.4 133 30.1
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 120 31.7
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.9e-06 57.0 118 33.9
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.5e-06 56.6 137 37.2
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 3.3e-06 56.2 113 33.6
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.3e-06 56.2 168 28.0
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 3.3e-06 56.2 136 30.9
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 4.3e-06 55.8 111 33.3
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.3e-06 55.8 112 33.0
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.3e-06 55.8 130 32.3
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 5.6e-06 55.5 109 34.9
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 5.6e-06 55.5 136 30.9
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.6e-06 55.5 128 32.8
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 9.6e-06 54.7 96 36.5
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.6e-06 54.7 58 51.7
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 9.6e-06 54.7 113 33.6


User provided reference genes

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