Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009698 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.7e-94 349.4 176 100.0
CSS0011897 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.0e-88 330.1 176 94.9
CSS0019604 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 3.7e-86 321.6 191 88.0
CSS0007995 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.0e-84 315.8 174 93.1
CSS0023575 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 2.6e-63 245.7 190 71.6
Actinidia32353 Actinidia chinensis HOM05D001299 ORTHO05D009516 4.9e-62 241.5 187 70.6
GSVIVG01037941001 Vitis vinifera HOM05D001299 ORTHO05D009516 7.8e-60 234.2 179 68.2
TAR626G1915 Trochodendron aralioides HOM05D001299 ORTHO05D009516 7.3e-58 227.6 178 69.1
Haze_05959 Corylus avellana HOM05D001299 ORTHO05D009516 9.5e-58 227.3 186 64.5
FvH4_3g11560 Fragaria vesca HOM05D001299 ORTHO05D009516 1.2e-57 226.9 186 64.5
FAN16G0158 Fragaria x ananassa HOM05D001299 ORTHO05D009516 1.2e-57 226.9 186 64.5
Lj6g0006807 Lotus japonicus HOM05D001299 ORTHO05D009516 1.6e-57 226.5 179 65.4
Cfa000759 Carpinus fangiana HOM05D001299 ORTHO05D009516 3.6e-57 225.3 186 65.1
RcHm_v2.0_Chr5g0018511 Rosa chinensis HOM05D001299 ORTHO05D009516 6.1e-57 224.6 186 64.5
Sed0008848 Sechium edule HOM05D001299 ORTHO05D009516 1.0e-56 223.8 179 65.4
FAN21G1530 Fragaria x ananassa HOM05D001299 ORTHO05D009516 1.4e-56 223.4 186 64.0
FAN25G0007 Fragaria x ananassa HOM05D001299 ORTHO05D009516 1.4e-56 223.4 186 63.4
Potri.011G155500 Populus trichocarpa HOM05D001299 ORTHO05D009516 4.0e-56 221.9 186 64.5
Phvul.006G122300 Phaseolus vulgaris HOM05D001299 ORTHO05D009516 5.2e-56 221.5 179 63.7
Sabra11G0144300 Salix brachista HOM05D001299 ORTHO05D009516 5.2e-56 221.5 179 65.9
Lalb_Chr15g0089001 Lupinus albus HOM05D001299 ORTHO05D009516 6.8e-56 221.1 179 64.2
Ca_00935_v3 Cicer arietinum L. HOM05D001299 ORTHO05D009516 8.9e-56 220.7 179 64.8
Glyma.15G136200 Glycine max HOM05D001299 ORTHO05D009516 1.2e-55 220.3 179 63.1
ClCG01G008880 Citrullus lanatus HOM05D001299 ORTHO05D009516 1.5e-55 219.9 186 62.4
Manes.03G067266 Manihot esculenta HOM05D001299 ORTHO05D009516 4.4e-55 218.4 179 63.7
COL.COLO4_26895 Corchorus olitorius HOM05D001299 ORTHO05D009516 7.5e-55 217.6 186 61.8
Prupe.4G102900 Prunus persica HOM05D001299 ORTHO05D009516 7.5e-55 217.6 179 63.7
Thecc.06G007400 Theobroma cacao HOM05D001299 ORTHO05D009516 7.5e-55 217.6 186 62.4
MD10G1240700 Malus domestica HOM05D001299 ORTHO05D009516 9.8e-55 217.2 186 60.8
Ciclev10015984m.g Citrus clementina HOM05D001299 ORTHO05D009516 1.3e-54 216.9 178 63.5
Lj1A1156T42 Lonicera japonica HOM05D001299 ORTHO05D009516 1.3e-54 216.9 186 62.9
VMungo0540G0517 Vigna mungo HOM05D001299 ORTHO05D009516 1.7e-54 216.5 179 62.0
Cc09_g07140 Coffea canephora HOM05D001299 ORTHO05D009516 3.7e-54 215.3 177 61.0
Eucgr.D01028 Eucalyptus grandis HOM05D001299 ORTHO05D009516 4.9e-54 214.9 186 61.3
Nn7g37865 Nelumbo nucifera HOM05D001299 ORTHO05D009516 4.9e-54 214.9 178 64.0
TPR.G15970 Trifolium pratense HOM05D001299 ORTHO05D009516 1.1e-53 213.8 179 63.7
Medtr2g032540 Medicago truncatula HOM05D001299 ORTHO05D009516 1.4e-53 213.4 178 63.5
Psat1g163720 Pisum sativum HOM05D001299 ORTHO05D009516 1.4e-53 213.4 186 61.8
arahy.Tifrunner.gnm1.ann1.85QD0P Arachis hypogaea HOM05D001299 ORTHO05D009516 4.1e-53 211.8 179 61.5
Atru.chr10.662 Acer truncatum HOM05D001299 ORTHO05D009516 5.4e-53 211.5 187 61.5
MSTRG.16317 Avicennia marina HOM05D001299 ORTHO05D009516 5.4e-53 211.5 178 61.8
Gorai.010G142100 Gossypium raimondii HOM05D001299 ORTHO05D009516 7.0e-53 211.1 178 62.9
Gohir.D06G121900 Gossypium hirsutum HOM05D001299 ORTHO05D009516 9.2e-53 210.7 178 62.9
MELO3C021811.2 Cucumis melo HOM05D001299 ORTHO05D009516 4.6e-52 208.4 211 55.9
Duzib235G0189 Durio zibethinus HOM05D001299 ORTHO05D009516 4.6e-52 208.4 175 61.7
MBI18_g26477_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 1.3e-51 206.8 178 61.2
CANSAT35G1957 Cannabis sativa HOM05D001299 ORTHO05D009516 2.3e-51 206.1 184 62.0
CiPaw.10G111000 Carya illinoinensis HOM05D001299 ORTHO05D009516 3.0e-51 205.7 187 61.0
SalBow8G0840 Salvia bowleyana HOM05D001299 ORTHO05D009516 8.6e-51 204.1 178 59.0
SalBow8G5388 Salvia bowleyana HOM05D001299 ORTHO05D009516 8.6e-51 204.1 178 59.0
Solyc02g069620.4 Solanum lycopersicum HOM05D001299 ORTHO05D009516 8.6e-51 204.1 177 59.3
Nitab4.5_0010415g0020 Nicotiana tabacum HOM05D001299 ORTHO05D009516 1.1e-50 203.8 199 54.8
Sopen02g018750 Solanum pennellii HOM05D001299 ORTHO05D009516 1.1e-50 203.8 177 58.8
Nitab4.5_0007613g0040 Nicotiana tabacum HOM05D001299 ORTHO05D009516 1.5e-50 203.4 199 54.3
CAN.G675.34 Capsicum annuum HOM05D001299 ORTHO05D009516 1.9e-50 203.0 173 60.1
TWI38G0147 Tripterygium wilfordii HOM05D001299 ORTHO05D009516 2.5e-50 202.6 178 59.6
arahy.Tifrunner.gnm1.ann1.ZN1LAP Arachis hypogaea HOM05D001299 ORTHO05D009516 3.3e-50 202.2 175 60.6
PGSC0003DMG400021135 Solanum tuberosum HOM05D001299 ORTHO05D009516 7.3e-50 201.1 200 52.5
Lsat_1_v5_gn_1_130040 Lactuca sativa HOM05D001299 ORTHO05D009516 2.8e-49 199.1 180 58.3
ATR1098G024 Amborella trichopoda HOM05D001299 ORTHO05D009516 3.1e-48 195.7 179 57.0
CsaV3_1G037750 Cucumis sativus L. HOM05D001299 ORTHO05D009516 1.5e-47 193.4 161 63.4
HanXRQChr11g0341271 Helianthus annuus HOM05D001299 ORTHO05D009516 1.5e-47 193.4 174 58.0
Cpa.g.sc285.1 Carica papaya HOM05D001299 ORTHO05D009516 3.4e-47 192.2 148 66.2
Migut.M01940 Erythranthe guttata HOM05D001299 ORTHO05D009516 9.8e-47 190.7 179 55.9
THA.LOC104806244 Tarenaya hassleriana HOM05D001299 ORTHO05D009516 8.3e-46 187.6 177 54.2
SGA_v2.0_scaffold298G47639 Striga asiatica HOM05D001299 ORTHO05D009516 1.4e-45 186.8 224 48.7
MBI18_g14310_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 9.2e-45 184.1 149 63.1
Os03g0781400 Oryza sativa ssp. japonica HOM05D001299 ORTHO05D009516 2.7e-44 182.6 176 54.5
BcaC06g31610 Brassica carinata HOM05D001299 ORTHO05D009516 5.0e-43 178.3 178 51.1
A06p47140 Brassica napus HOM05D001299 ORTHO05D009516 1.9e-42 176.4 178 50.6
CSS0007807 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.9e-42 176.4 161 61.5
CSS0046492 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.9e-42 176.4 161 61.5
AL8G15300 Arabidopsis lyrata HOM05D001299 ORTHO05D009516 7.3e-42 174.5 187 49.7
Thhalv10000979m.g Eutrema salsugineum HOM05D001299 ORTHO05D009516 7.3e-42 174.5 187 50.3
BcaC06g34545 Brassica carinata HOM05D001299 ORTHO05D009516 9.5e-42 174.1 179 50.3
Sp2g09310 Schrenkiella parvula HOM05D001299 ORTHO05D009516 1.2e-41 173.7 187 49.7
BraA06t27586Z Brassica rapa HOM05D001299 ORTHO05D009516 1.6e-41 173.3 186 49.5
CSS0034631 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.6e-41 173.3 174 60.3
Aa31LG9G8690 Aethionema arabicum HOM05D001299 ORTHO05D009516 6.2e-41 171.4 187 51.9
BolC7t43265H Brassica oleracea HOM05D001299 ORTHO05D009516 2.3e-40 169.5 186 48.9
AT5G44520 Arabidopsis thaliana HOM05D001299 ORTHO05D009516 4.0e-40 168.7 178 49.4
C07p27350 Brassica napus HOM05D001299 ORTHO05D009516 5.2e-40 168.3 186 48.4
Carub.0008s0398 Capsella rubella HOM05D001299 ORTHO05D009516 1.2e-39 167.2 187 49.2
Peaxi162Scf00195g00521 Petunia axillaris HOM05D001299 ORTHO05D009516 1.5e-39 166.8 218 45.0
Pp3c16_13350 Physcomitrium patens HOM05D001299 ORTHO05D009516 1.6e-36 156.8 178 44.4
Glyma.09G030500 Glycine max HOM05D001299 ORTHO05D009516 6.6e-27 124.8 85 69.4
Gohir.A06G118100 Gossypium hirsutum HOM05D001299 ORTHO05D009516 1.5e-23 113.6 110 58.2
CDE03G0248 Ceratophyllum demersum HOM05D001299 ORTHO05D009516 1.1e-21 107.5 111 53.2
QL05p065109 Quercus lobata HOM05D001299 ORTHO05D009516 1.1e-21 107.5 78 71.8
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 2.9e-14 82.8 45 80.0
Oeu063345.2 Olea europaea HOM05D001299 ORTHO05D009516 4.9e-14 82.0 66 63.6
MCO05G574 Micromonas commoda HOM05D001299 ORTHO05D009516 3.2e-13 79.3 206 25.7
PRCOL_00006791 Prasinoderma coloniale HOM05D001299 ORTHO05D009516 7.9e-12 74.7 190 30.0
Pp3c5_830 Physcomitrium patens HOM05D001299 ORTHO05D009516 1.1e-10 70.9 82 50.0
CARHR178590 Cardamine hirsuta HOM05D001299 ORTHO05D009516 2.8e-09 66.2 59 54.2
Cre07.g314600 Chlamydomonas reinhardtii HOM05D001299 ORTHO05D009516 4.8e-09 65.5 180 27.8
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-07 60.5 46 63.0


User provided reference genes

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