Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.5e-116 422.9 220 100.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.8e-53 213.4 233 57.1
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.8e-50 203.4 232 57.8
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.2e-47 192.6 187 62.0
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.0e-46 188.0 239 54.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.3e-45 186.4 232 53.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.2e-43 177.9 233 51.9
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 9.1e-42 174.5 264 47.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.5e-41 172.2 248 46.0
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 4.5e-41 172.2 248 47.6
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.0e-40 171.0 269 47.6
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.5e-39 167.2 249 49.8
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.9e-39 166.8 247 48.2
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.9e-39 166.8 280 43.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.2e-39 165.6 261 46.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 4.2e-39 165.6 261 46.0
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 4.2e-39 165.6 256 45.7
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 4.2e-39 165.6 252 47.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 5.5e-39 165.2 246 46.3
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.6e-38 163.7 256 46.9
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.1e-38 163.3 236 48.3
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.6e-38 162.5 228 47.8
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.1e-38 161.8 243 46.5
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 6.1e-38 161.8 252 47.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 6.1e-38 161.8 264 45.5
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 8.0e-38 161.4 237 46.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.0e-37 161.0 174 56.9
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.4e-37 160.6 242 45.0
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-37 159.8 232 46.6
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 3.0e-37 159.5 253 45.1
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 4.0e-37 159.1 230 49.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.2e-36 157.5 249 44.2
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.6e-36 156.4 230 47.4
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.4e-36 155.6 261 44.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.3e-35 154.1 262 42.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.2e-35 153.3 250 44.0
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.8e-35 152.9 225 51.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 3.7e-35 152.5 221 46.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 3.7e-35 152.5 244 44.3
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 4.8e-35 152.1 249 45.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.4e-34 149.8 243 46.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.1e-34 149.4 256 44.9
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.1e-34 149.4 245 46.1
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.4e-34 148.7 241 46.1
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.1e-34 147.9 256 43.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.0e-33 146.7 255 43.5
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.5e-33 146.0 229 45.0
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.5e-33 145.6 280 40.4
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 5.9e-33 145.2 240 45.8
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 7.7e-33 144.8 254 42.9
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.0e-32 144.4 229 48.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.3e-32 144.1 258 43.8
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.2e-32 143.3 261 42.9
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.2e-32 143.3 261 42.9
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.8e-32 142.5 268 43.3
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.5e-31 140.6 260 41.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.5e-31 138.7 246 43.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 9.5e-31 137.9 242 43.4
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.2e-30 137.5 248 43.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 3.6e-30 136.0 246 45.1
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.6e-30 136.0 267 41.9
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 4.7e-30 135.6 255 43.1
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.1e-30 135.2 243 44.9
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.0e-29 134.4 228 43.4
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.4e-29 134.0 244 43.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.0e-29 132.9 273 41.4
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 8.8e-29 131.3 248 40.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.5e-28 130.6 244 42.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.0e-28 130.2 244 42.2
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 9.8e-28 127.9 220 44.5
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.8e-28 127.9 241 43.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.8e-27 126.3 154 51.9
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.4e-26 123.2 289 37.7
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.1e-26 122.5 238 39.5
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.5e-25 119.4 231 39.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.3e-24 117.5 237 41.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.9e-24 116.3 239 41.8
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.8e-24 115.9 219 45.2
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 5.6e-23 112.1 246 37.8
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 7.3e-23 111.7 253 36.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 9.5e-23 111.3 232 39.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.2e-22 110.9 232 40.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.2e-22 110.9 241 38.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-22 110.2 226 44.7
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.1e-22 110.2 261 36.0
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.6e-22 109.4 241 38.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 4.7e-22 109.0 323 33.4
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 6.1e-22 108.6 248 37.5
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.0e-22 108.2 226 44.2
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.0e-21 106.3 215 41.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 4.0e-21 105.9 243 37.9
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 8.9e-21 104.8 182 42.9
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.5e-20 104.0 231 38.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.0e-20 103.6 147 48.3
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 3.4e-20 102.8 236 39.8
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.4e-20 102.8 237 37.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 7.5e-20 101.7 237 37.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.2e-19 100.1 193 42.0
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.2e-18 96.3 238 37.8
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.2e-17 94.4 311 32.5
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 2.7e-17 93.2 252 36.5
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 3.5e-17 92.8 249 36.9
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.0e-16 91.3 125 48.0
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.7e-16 90.5 217 39.2
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-16 90.5 217 39.2
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.3e-16 90.1 238 37.0
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 6.6e-16 88.6 124 48.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.1e-15 87.8 178 41.6
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.5e-15 87.4 228 35.1
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.3e-15 85.9 250 34.4
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 9.5e-15 84.7 230 36.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 6.2e-14 82.0 161 37.9
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.1e-13 79.7 249 32.9
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 8.3e-11 71.6 75 57.3
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.4e-10 70.9 142 39.4
unitig_37.g12336 Utricularia gibba HOM05D006486 ORTHO05D007888 1.2e-09 67.8 210 31.4
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.6e-09 67.4 203 32.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.5e-09 66.2 113 46.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 1.0e-08 64.7 75 50.7
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 1.7e-08 63.9 230 33.5
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.0e-08 63.2 163 33.7
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 7.3e-07 58.5 68 48.5


User provided reference genes

Program Settings