Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009641 Camellia sinensis var. sinensis HOM05D004254 ORTHO05D005184 2.0e-49 198.7 99 100.0
CSS0013925 Camellia sinensis var. sinensis HOM05D004254 ORTHO05D005184 8.3e-43 176.8 90 96.7
Actinidia12362 Actinidia chinensis HOM05D004254 ORTHO05D005184 2.0e-36 155.6 90 86.7
DCAR_012097 Daucus carota HOM05D004254 ORTHO05D005184 1.7e-35 152.5 91 80.2
Hma1.2p1_0163F.1_g073040 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 2.8e-35 151.8 89 82.0
COL.COLO4_06962 Corchorus olitorius HOM05D004254 ORTHO05D005184 1.4e-34 149.4 90 78.9
Cc04_g06150 Coffea canephora HOM05D004254 ORTHO05D005184 3.1e-34 148.3 89 79.8
Rhsim08G0126700 Rhododendron simsii HOM05D004254 ORTHO05D005184 3.1e-34 148.3 90 82.2
Solyc03g118640.3 Solanum lycopersicum HOM05D004254 ORTHO05D005184 5.4e-34 147.5 89 83.1
Sopen03g037600 Solanum pennellii HOM05D004254 ORTHO05D005184 5.4e-34 147.5 89 83.1
Nitab4.5_0001264g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 7.0e-34 147.1 89 83.1
Nitab4.5_0010223g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 7.0e-34 147.1 89 83.1
Duzib084G0705 Durio zibethinus HOM05D004254 ORTHO05D005184 1.6e-33 146.0 90 76.7
CAN.G843.50 Capsicum annuum HOM05D004254 ORTHO05D005184 2.7e-33 145.2 89 82.0
MSTRG.11304 Avicennia marina HOM05D004254 ORTHO05D005184 5.9e-33 144.1 90 78.9
Peaxi162Scf00314g00334 Petunia axillaris HOM05D004254 ORTHO05D005184 5.9e-33 144.1 89 80.9
Lj5A159T43 Lonicera japonica HOM05D004254 ORTHO05D005184 1.0e-32 143.3 88 81.8
Migut.I00270 Erythranthe guttata HOM05D004254 ORTHO05D005184 1.3e-32 142.9 90 77.8
GSVIVG01008461001 Vitis vinifera HOM05D004254 ORTHO05D005184 1.3e-32 142.9 89 79.8
FAN04G2545 Fragaria x ananassa HOM05D004254 ORTHO05D005184 8.6e-32 140.2 91 76.9
FAN13G1575 Fragaria x ananassa HOM05D004254 ORTHO05D005184 8.6e-32 140.2 91 76.9
QL10p030449 Quercus lobata HOM05D004254 ORTHO05D005184 8.6e-32 140.2 88 77.3
Haze_18876 Corylus avellana HOM05D004254 ORTHO05D005184 1.1e-31 139.8 88 75.0
SGA_v2.0_scaffold28G11766 Striga asiatica HOM05D004254 ORTHO05D005184 1.5e-31 139.4 91 75.8
TAR629G2841 Trochodendron aralioides HOM05D004254 ORTHO05D005184 2.5e-31 138.7 89 75.3
TAR629G3411 Trochodendron aralioides HOM05D004254 ORTHO05D005184 2.5e-31 138.7 89 75.3
Aqoxy3G00045 Aquilegia oxysepala HOM05D004254 ORTHO05D005184 3.3e-31 138.3 90 72.2
FvH4_5g17450 Fragaria vesca HOM05D004254 ORTHO05D005184 3.3e-31 138.3 92 73.9
Thecc.03G057600 Theobroma cacao HOM05D004254 ORTHO05D005184 3.3e-31 138.3 90 73.3
MD14G1237000 Malus domestica HOM05D004254 ORTHO05D005184 4.3e-31 137.9 90 74.4
Atru.chr9.1674 Acer truncatum HOM05D004254 ORTHO05D005184 7.3e-31 137.1 88 72.7
PSO017G0085 Papaver somniferum HOM05D004254 ORTHO05D005184 7.3e-31 137.1 90 73.3
PSO478G1825 Papaver somniferum HOM05D004254 ORTHO05D005184 7.3e-31 137.1 90 73.3
Sc10g0009220 Simmondsia chinensis HOM05D004254 ORTHO05D005184 9.5e-31 136.7 89 74.2
arahy.Tifrunner.gnm1.ann1.FFN37F Arachis hypogaea HOM05D004254 ORTHO05D005184 1.6e-30 136.0 90 71.1
arahy.Tifrunner.gnm1.ann1.QLLT1A Arachis hypogaea HOM05D004254 ORTHO05D005184 1.6e-30 136.0 90 71.1
Medtr6g069685 Medicago truncatula HOM05D004254 ORTHO05D005184 1.6e-30 136.0 89 70.8
Prupe.5G234300 Prunus persica HOM05D004254 ORTHO05D005184 3.6e-30 134.8 90 74.4
AL1G30650 Arabidopsis lyrata HOM05D004254 ORTHO05D005184 4.7e-30 134.4 90 67.8
C05p16550 Brassica napus HOM05D004254 ORTHO05D005184 4.7e-30 134.4 90 66.7
Carub.0001s1789 Capsella rubella HOM05D004254 ORTHO05D005184 4.7e-30 134.4 90 68.9
Manes.06G005200 Manihot esculenta HOM05D004254 ORTHO05D005184 4.7e-30 134.4 90 72.2
Potri.015G037000 Populus trichocarpa HOM05D004254 ORTHO05D005184 4.7e-30 134.4 90 72.2
FAN18G0674 Fragaria x ananassa HOM05D004254 ORTHO05D005184 6.1e-30 134.0 92 72.8
Nn4g24267 Nelumbo nucifera HOM05D004254 ORTHO05D005184 6.1e-30 134.0 88 72.7
BcaC05g25721 Brassica carinata HOM05D004254 ORTHO05D005184 8.0e-30 133.7 90 67.8
A06p14290 Brassica napus HOM05D004254 ORTHO05D005184 8.0e-30 133.7 90 67.8
BolC5t30352H Brassica oleracea HOM05D004254 ORTHO05D005184 8.0e-30 133.7 90 67.8
BraA06t24558Z Brassica rapa HOM05D004254 ORTHO05D005184 8.0e-30 133.7 90 67.8
Lj2g0021015 Lotus japonicus HOM05D004254 ORTHO05D005184 8.0e-30 133.7 90 66.7
CiPaw.15G144100 Carya illinoinensis HOM05D004254 ORTHO05D005184 1.0e-29 133.3 90 68.9
Aa31LG7G2820 Aethionema arabicum HOM05D004254 ORTHO05D005184 1.4e-29 132.9 90 67.8
RcHm_v2.0_Chr7g0178241 Rosa chinensis HOM05D004254 ORTHO05D005184 1.4e-29 132.9 93 72.0
Gohir.A03G092900 Gossypium hirsutum HOM05D004254 ORTHO05D005184 3.0e-29 131.7 90 71.1
Gohir.D02G121800 Gossypium hirsutum HOM05D004254 ORTHO05D005184 3.0e-29 131.7 90 71.1
Gorai.005G132300 Gossypium raimondii HOM05D004254 ORTHO05D005184 3.0e-29 131.7 90 71.1
Sed0023132 Sechium edule HOM05D004254 ORTHO05D005184 3.0e-29 131.7 88 70.5
AT1G18270 Arabidopsis thaliana HOM05D004254 ORTHO05D005184 4.0e-29 131.3 90 66.7
Eucgr.B00991 Eucalyptus grandis HOM05D004254 ORTHO05D005184 4.0e-29 131.3 88 69.3
Glyma.07G103000 Glycine max HOM05D004254 ORTHO05D005184 4.0e-29 131.3 90 66.7
TPR.G8645 Trifolium pratense HOM05D004254 ORTHO05D005184 6.8e-29 130.6 89 68.5
Sp1g16240 Schrenkiella parvula HOM05D004254 ORTHO05D005184 1.2e-28 129.8 90 66.7
Sabra15G0031800 Salix brachista HOM05D004254 ORTHO05D005184 1.5e-28 129.4 90 67.8
Sabra15G0032400 Salix brachista HOM05D004254 ORTHO05D005184 1.5e-28 129.4 90 67.8
Sabra15G0059400 Salix brachista HOM05D004254 ORTHO05D005184 1.5e-28 129.4 90 67.8
Thhalv10006567m.g Eutrema salsugineum HOM05D004254 ORTHO05D005184 2.0e-28 129.0 90 65.6
Phvul.004G150100 Phaseolus vulgaris HOM05D004254 ORTHO05D005184 2.0e-28 129.0 90 65.6
Ah.13g074660 Amaranthus hybridus HOM05D004254 ORTHO05D005184 4.4e-28 127.9 89 70.8
SalBow7G0492 Salvia bowleyana HOM05D004254 ORTHO05D005184 5.7e-28 127.5 91 70.3
VMungo0464G0766 Vigna mungo HOM05D004254 ORTHO05D005184 7.5e-28 127.1 89 64.0
CANSAT21G0981 Cannabis sativa HOM05D004254 ORTHO05D005184 1.3e-27 126.3 88 70.5
Lalb_Chr14g0370611 Lupinus albus HOM05D004254 ORTHO05D005184 1.7e-27 125.9 90 64.4
ClCG06G014240 Citrullus lanatus HOM05D004254 ORTHO05D005184 6.4e-27 124.0 90 66.7
Psat1g030920 Pisum sativum HOM05D004254 ORTHO05D005184 8.3e-27 123.6 89 65.2
CsaV3_1G004440 Cucumis sativus L. HOM05D004254 ORTHO05D005184 1.1e-26 123.2 90 65.6
Ca_25341_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 1.8e-26 122.5 91 64.8
Ca_25342_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 1.8e-26 122.5 91 64.8
MELO3C017366.2 Cucumis melo HOM05D004254 ORTHO05D005184 1.6e-25 119.4 90 64.4
TWI81G0051 Tripterygium wilfordii HOM05D004254 ORTHO05D005184 1.6e-25 119.4 90 65.6
PGR083G1460 Punica granatum HOM05D004254 ORTHO05D005184 2.7e-25 118.6 89 65.2
Ciclev10010566m.g Citrus clementina HOM05D004254 ORTHO05D005184 6.6e-24 114.0 72 69.4
ECA233G1972 Erigeron canadensis HOM05D004254 ORTHO05D005184 1.1e-23 113.2 74 70.3
unitig_749.g14137 Utricularia gibba HOM05D004254 ORTHO05D005184 1.5e-23 112.8 76 65.8
HanXRQChr17g0559181 Helianthus annuus HOM05D004254 ORTHO05D005184 1.9e-23 112.5 73 74.0
Lsat_1_v5_gn_8_141761 Lactuca sativa HOM05D004254 ORTHO05D005184 5.6e-23 110.9 73 75.3
Sabra15G0033400 Salix brachista HOM05D004254 ORTHO05D005184 7.3e-23 110.5 82 64.6
SEGI_15506 Sequoiadendron giganteum HOM05D004254 ORTHO05D005184 5.8e-20 100.9 91 53.8
CiPaw.10G048800 Carya illinoinensis HOM05D004254 ORTHO05D005184 7.5e-20 100.5 62 74.2
AUR62035874 Chenopodium quinoa HOM05D004254 ORTHO05D005184 1.1e-18 96.7 63 76.2
HPP92_023491 Vanilla planifolia HOM05D004254 ORTHO05D005184 1.9e-18 95.9 90 53.3
SMO117G0106 Selaginella moellendorffii HOM05D004254 ORTHO05D005184 3.5e-17 91.7 91 49.5
Os06g0258900 Oryza sativa ssp. japonica HOM05D004254 ORTHO05D005184 6.0e-17 90.9 91 51.6
Pp3c23_11630 Physcomitrium patens HOM05D004254 ORTHO05D005184 6.0e-17 90.9 91 50.5
CARHR018830 Cardamine hirsuta HOM05D004254 ORTHO05D005184 8.6e-16 87.0 91 45.1
Cpa.g.sc3.389 Carica papaya HOM05D004254 ORTHO05D005184 8.6e-16 87.0 91 45.1
Hma1.2p1_0163F.1_g073050 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 3.3e-15 85.1 91 42.9
Zm00001eb280650 Zea mays HOM05D004254 ORTHO05D005184 5.6e-15 84.3 71 59.2
Nn009s41423 Nelumbo nucifera HOM05D004254 ORTHO05D005184 7.3e-15 84.0 99 39.4
CBR_g29818 Chara braunii HOM05D004254 ORTHO05D005184 1.6e-14 82.8 62 59.7
ATR1102G040 Amborella trichopoda HOM05D004254 ORTHO05D005184 6.2e-14 80.9 91 40.7
Sabra15G0030800 Salix brachista HOM05D004254 ORTHO05D005184 6.8e-13 77.4 80 42.5
Mapoly0094s0055 Marchantia polymorpha HOM05D004254 ORTHO05D005184 1.3e-11 73.2 65 53.8
arahy.Tifrunner.gnm1.ann1.PNMJ0W Arachis hypogaea HOM05D004254 ORTHO05D005184 7.1e-10 67.4 72 40.3
Sabra15G0033300 Salix brachista HOM05D004254 ORTHO05D005184 1.3e-08 63.2 72 38.9
Sabra15G0058300 Salix brachista HOM05D004254 ORTHO05D005184 1.3e-08 63.2 72 38.9
vmacro17775 Vaccinium macrocarpon HOM05D004254 ORTHO05D005184 3.0e-08 62.0 61 44.3


User provided reference genes

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