Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.8e-43 178.7 84 100.0
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.9e-41 171.4 84 95.2
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.9e-40 168.7 85 94.1
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 7.5e-21 103.6 80 61.2
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 7.5e-21 103.6 80 61.2
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 7.5e-21 103.6 80 61.2
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 4.9e-20 100.9 84 63.1
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 1.1e-19 99.8 80 60.0
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 1.4e-19 99.4 78 66.7
CSS0014654 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.6e-18 95.9 74 66.2
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 2.1e-18 95.5 81 55.6
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 4.6e-18 94.4 81 58.0
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 7.8e-18 93.6 84 57.1
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.7e-17 92.4 74 56.8
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 4.3e-16 87.8 79 60.8
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 5.6e-16 87.4 83 50.6
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 5.6e-16 87.4 82 59.8
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 5.6e-16 87.4 82 59.8
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 7.3e-16 87.0 84 58.3
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 9.5e-16 86.7 82 56.1
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 9.5e-16 86.7 82 56.1
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 8.1e-15 83.6 58 69.0
Actinidia13165 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.8e-14 82.4 74 58.1
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 1.8e-14 82.4 84 50.0
Rhsim05G0199800 Rhododendron simsii HOM05D006892 ORTHO05D008592 1.8e-14 82.4 84 63.1
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 2.4e-14 82.0 83 49.4
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 2.4e-14 82.0 84 48.8
Manes.08G082100 Manihot esculenta HOM05D006892 ORTHO05D008592 2.4e-14 82.0 75 56.0
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 3.1e-14 81.6 78 51.3
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 4.0e-14 81.3 81 55.6
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 4.0e-14 81.3 84 54.8
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 5.2e-14 80.9 83 48.2
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 5.2e-14 80.9 83 48.2
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 5.2e-14 80.9 80 53.8
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 8.9e-14 80.1 85 57.6
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 1.2e-13 79.7 83 48.2
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.2e-13 79.7 83 48.2
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.5e-13 79.3 83 48.2
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.5e-13 79.3 77 50.6
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 1.5e-13 79.3 78 55.1
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 2.6e-13 78.6 78 50.0
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 3.4e-13 78.2 83 47.0
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 4.4e-13 77.8 74 55.4
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 5.8e-13 77.4 78 51.3
Cc06_g02080 Coffea canephora HOM05D006892 ORTHO05D008592 1.3e-12 76.3 90 48.9
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 2.2e-12 75.5 74 51.4
Lsat_1_v5_gn_9_32981 Lactuca sativa HOM05D006892 ORTHO05D008592 2.9e-12 75.1 77 51.9
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 2.9e-12 75.1 75 49.3
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 3.8e-12 74.7 80 50.0
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 4.9e-12 74.3 78 47.4
TPR.G32561 Trifolium pratense HOM05D006892 ORTHO05D008592 4.9e-12 74.3 80 45.0
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 6.4e-12 73.9 59 57.6
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 8.4e-12 73.6 79 48.1
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.4e-11 72.8 77 54.5
Medtr4g019640 Medicago truncatula HOM05D006892 ORTHO05D008592 1.9e-11 72.4 75 48.0
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 1.9e-11 72.4 80 52.5
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 2.4e-11 72.0 82 48.8
Phvul.008G114100 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 3.2e-11 71.6 84 45.2
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 4.1e-11 71.2 79 48.1
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 4.1e-11 71.2 84 48.8
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 4.1e-11 71.2 84 44.0
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 5.4e-11 70.9 75 48.0
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea HOM05D006892 ORTHO05D008592 7.1e-11 70.5 75 44.0
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea HOM05D006892 ORTHO05D008592 9.2e-11 70.1 72 44.4
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 1.2e-10 69.7 50 56.0
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 1.2e-10 69.7 50 56.0
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 1.6e-10 69.3 77 49.4
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.6e-10 69.3 69 52.2
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.6e-10 69.3 69 52.2
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 4.6e-10 67.8 78 48.7
Psat7g241320 Pisum sativum HOM05D006892 ORTHO05D008592 4.6e-10 67.8 79 43.0
GSVIVG01034067001 Vitis vinifera HOM05D006892 ORTHO05D008592 4.6e-10 67.8 67 53.7
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 6.0e-10 67.4 77 48.1
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 7.8e-10 67.0 84 42.9
CAN.G697.1 Capsicum annuum HOM05D006892 ORTHO05D008592 1.0e-09 66.6 97 41.2
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 1.0e-09 66.6 73 52.1
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 1.7e-09 65.9 73 49.3
Potri.006G092300 Populus trichocarpa HOM05D006892 ORTHO05D008592 2.3e-09 65.5 82 43.9
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 3.0e-09 65.1 78 46.2
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 3.9e-09 64.7 86 46.5
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 5.1e-09 64.3 78 44.9
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 5.1e-09 64.3 44 65.9
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.7e-09 63.5 45 60.0
Cpa.g.sc56.60 Carica papaya HOM05D006892 ORTHO05D008592 1.1e-08 63.2 81 46.9
Sopen09g006180 Solanum pennellii HOM05D006892 ORTHO05D008592 1.1e-08 63.2 82 43.9
Sabra06G0070000 Salix brachista HOM05D006892 ORTHO05D008592 1.5e-08 62.8 74 44.6
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 1.9e-08 62.4 43 51.2
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 2.5e-08 62.0 81 45.7
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 3.3e-08 61.6 82 47.6
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 3.3e-08 61.6 38 60.5
Sabra10G0151100 Salix brachista HOM05D006892 ORTHO05D008592 3.3e-08 61.6 76 46.1
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 4.3e-08 61.2 44 61.4
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 4.3e-08 61.2 76 42.1
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.2e-07 59.7 84 40.5
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 2.1e-07 58.9 59 54.2
Potri.008G061600 Populus trichocarpa HOM05D006892 ORTHO05D008592 2.8e-07 58.5 41 58.5
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 3.6e-07 58.2 87 43.7
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 3.6e-07 58.2 90 41.1
TAR633G0009 Trochodendron aralioides HOM05D006892 ORTHO05D414936 3.6e-07 58.2 79 49.4
HPP92_019858 Vanilla planifolia HOM05D006892 ORTHO05D008592 4.7e-07 57.8 73 43.8
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 6.2e-07 57.4 43 53.5
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 1.4e-06 56.2 36 61.1
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 1.8e-06 55.8 78 43.6
Glyma.18G033400 Glycine max HOM05D006892 ORTHO05D008592 3.1e-06 55.1 82 40.2
MELO3C033485.2 Cucumis melo HOM05D006892 ORTHO05D008592 4.0e-06 54.7 42 52.4
Sopen09g006190 Solanum pennellii HOM05D006892 ORTHO05D008592 4.0e-06 54.7 67 41.8


User provided reference genes

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