Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009629 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 3.9e-202 708.0 370 100.0
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 7.3e-76 288.5 357 54.6
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 2.4e-50 203.8 357 46.2
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 6.0e-46 189.1 334 42.8
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 6.0e-46 189.1 334 42.8
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 7.9e-46 188.7 382 40.6
Hma1.2p1_0589F.1_g184750 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 7.4e-28 129.0 361 36.0
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 9.0e-26 122.1 372 34.9
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 4.5e-25 119.8 375 32.8
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 7.6e-25 119.0 374 32.4
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 1.4e-23 114.8 374 34.2
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 1.4e-23 114.8 397 32.2
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 1.8e-21 107.8 371 31.5
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 3.9e-21 106.7 358 33.0
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 4.1e-18 96.7 373 30.6
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 1.5e-17 94.7 354 31.4
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 5.9e-17 92.8 375 31.7
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 1.7e-16 91.3 374 29.1
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 3.8e-16 90.1 364 30.2
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 8.5e-16 89.0 364 30.5
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 1.2e-14 85.1 372 28.8
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 5.1e-13 79.7 377 28.4
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 4.3e-12 76.6 341 30.8
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 2.2e-11 74.3 349 28.9
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 8.2e-11 72.4 340 30.6
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.1e-10 72.0 340 29.4
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.4e-10 71.6 345 29.9
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 1.4e-10 71.6 336 27.4
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 3.1e-10 70.5 345 29.3
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.1e-10 68.9 340 28.5
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 1.2e-09 68.6 359 28.1
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 2.0e-09 67.8 349 29.8
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 5.9e-09 66.2 427 25.8
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 5.9e-09 66.2 323 27.6
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 7.7e-09 65.9 253 30.8
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 1.3e-08 65.1 359 29.5
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 1.6e-06 58.2 117 34.2


User provided reference genes

Program Settings