Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-50 202.6 97 100.0
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-43 178.7 92 92.4
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-43 177.2 94 87.2
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.9e-41 169.9 92 87.0
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.4e-40 166.8 92 85.9
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-39 166.4 92 84.8
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-39 166.0 97 80.4
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-37 159.8 97 79.4
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.1e-37 157.5 97 79.4
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-35 152.9 101 74.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-35 152.9 101 74.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-35 152.9 101 74.3
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-35 151.8 101 73.3
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-32 141.4 96 67.7
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-32 140.6 96 67.7
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-32 140.6 96 68.8
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.4e-32 140.2 96 66.7
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.2e-31 137.9 96 68.8
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-30 135.6 96 65.6
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.0e-30 134.0 96 64.6
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 2.8e-27 125.2 96 60.4
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 6.2e-27 124.0 96 60.4
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 1.4e-26 122.9 96 59.4
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 6.9e-26 120.6 96 58.3
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 2.6e-25 118.6 96 57.3
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 4.5e-25 117.9 96 57.3
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-23 111.7 100 56.0
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.1e-23 110.5 74 71.6
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-21 106.3 96 51.0
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-21 105.9 116 51.7
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.9e-21 104.8 96 52.1
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 8.7e-21 103.6 96 54.2
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.3e-20 101.3 83 53.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-20 101.3 96 50.0
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-19 99.8 74 64.9
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.8e-19 97.8 96 47.9
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 4.8e-19 97.8 85 54.1
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.2e-19 97.4 96 49.0
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.5e-17 92.8 97 49.5
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-16 89.4 96 46.9
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-16 89.0 96 46.9
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-16 89.0 96 46.9
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-16 88.2 81 51.9
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 4.9e-16 87.8 61 65.6
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-15 84.7 96 44.8
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-14 83.2 80 48.8
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-14 82.4 60 58.3
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.6e-14 81.3 58 62.1
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.9e-14 80.5 54 63.0
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-13 78.6 78 48.7
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 6.7e-13 77.4 53 64.2
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 1.9e-12 75.9 100 39.0
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-12 75.9 83 45.8
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-12 75.1 58 58.6
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-12 75.1 118 37.3
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-11 73.2 101 38.6
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-11 73.2 101 41.6
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-11 72.0 101 41.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-11 72.0 101 41.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-11 71.6 101 40.6
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-11 71.6 101 43.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.2e-11 70.5 50 58.0
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-10 70.1 101 40.6
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-10 69.3 101 35.6
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-10 69.3 96 34.4
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-10 68.6 101 39.6
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-10 68.6 45 66.7
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 5.3e-10 67.8 96 34.4
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 5.3e-10 67.8 96 34.4
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-10 67.8 96 34.4
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 6.9e-10 67.4 100 39.0
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 6.9e-10 67.4 96 34.4
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 1.2e-09 66.6 96 33.3
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 2.0e-09 65.9 96 33.3
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.6e-09 65.5 71 46.5
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.6e-09 65.5 48 58.3
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 3.4e-09 65.1 90 37.8
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-09 64.7 72 44.4
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 5.9e-09 64.3 96 30.2
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 7.6e-09 63.9 96 33.3
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.3e-08 63.2 96 30.2
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-08 63.2 101 33.7
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.2e-08 62.4 36 77.8
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 5.0e-08 61.2 96 33.3
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.5e-08 60.8 48 56.2
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-07 60.1 70 45.7
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-07 59.7 43 69.8
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 2.5e-07 58.9 65 43.1
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 7.2e-07 57.4 92 31.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-07 57.0 89 31.5
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 2.7e-06 55.5 41 58.5
CSS0037544 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 55.1 43 67.4


User provided reference genes

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