Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.9e-51 204.9 103 100.0
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.0e-47 192.2 103 95.1
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.2e-46 188.7 104 93.3
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.2e-44 183.0 103 89.3
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.3e-42 174.5 103 85.4
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.6e-25 119.4 103 65.0
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.4e-24 115.5 103 64.1
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 1.5e-23 112.8 103 61.2
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.9e-23 110.2 103 61.2
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 2.2e-22 109.0 103 59.2
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 2.2e-22 109.0 103 59.2
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 1.2e-20 103.2 96 58.3
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 6.0e-20 100.9 94 62.8
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 3.9e-19 98.2 106 52.8
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 2.5e-18 95.5 100 54.0
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 5.6e-18 94.4 103 51.5
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 7.3e-18 94.0 103 50.5
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 7.3e-18 94.0 103 50.5
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.6e-17 92.8 103 55.3
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 2.1e-17 92.4 97 51.5
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 5.3e-16 87.8 103 49.5
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 2.6e-15 85.5 101 50.5
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 2.6e-15 85.5 97 48.5
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 3.4e-15 85.1 100 49.0
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 5.8e-15 84.3 103 42.7
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 7.6e-15 84.0 103 46.6
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 9.9e-15 83.6 97 49.5
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 9.9e-15 83.6 104 46.2
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 1.7e-14 82.8 100 48.0
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 2.2e-14 82.4 100 47.0
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 2.2e-14 82.4 96 49.0
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 4.9e-14 81.3 98 46.9
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 4.9e-14 81.3 103 47.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 8.4e-14 80.5 100 49.0
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 1.4e-13 79.7 91 47.3
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 2.4e-13 79.0 100 45.0
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 2.4e-13 79.0 100 45.0
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 2.4e-13 79.0 103 50.5
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.2e-12 76.6 99 47.5
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.6e-12 76.3 100 46.0
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.1e-12 75.9 103 45.6
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 2.1e-12 75.9 101 48.5
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 7.8e-12 73.9 104 45.2
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 1.3e-11 73.2 97 45.4
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 2.3e-11 72.4 97 44.3
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 3.0e-11 72.0 100 45.0
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 3.0e-11 72.0 91 48.4
Actinidia08019 Actinidia chinensis HOM05D004838 ORTHO05D005373 1.1e-10 70.1 102 45.1
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.1e-10 70.1 100 43.0
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 1.1e-10 70.1 100 47.0
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 1.5e-10 69.7 100 43.0
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 1.5e-10 69.7 101 42.6
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 3.3e-10 68.6 101 45.5
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 4.3e-10 68.2 100 46.0
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 4.3e-10 68.2 100 46.0
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 4.3e-10 68.2 94 46.8
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 5.6e-10 67.8 91 44.0
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 5.6e-10 67.8 100 43.0
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 5.6e-10 67.8 103 39.8
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 7.3e-10 67.4 100 46.0
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 7.3e-10 67.4 100 42.0
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 7.3e-10 67.4 101 41.6
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 2.1e-09 65.9 100 40.0
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.8e-09 65.5 105 43.8
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.6e-09 65.1 101 46.5
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 3.6e-09 65.1 100 45.0
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 8.1e-09 63.9 100 37.0
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 8.1e-09 63.9 100 44.0
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 8.1e-09 63.9 100 39.0
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 1.4e-08 63.2 100 37.0
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 1.8e-08 62.8 91 45.1
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.1e-08 62.0 101 44.6
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.0e-08 61.6 100 43.0
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 4.0e-08 61.6 100 38.0
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 5.3e-08 61.2 102 45.1
MBI18_g19832_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 5.3e-08 61.2 103 40.8
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 5.3e-08 61.2 97 40.2
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 5.3e-08 61.2 81 44.4
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 6.9e-08 60.8 100 35.0
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 9.0e-08 60.5 101 44.6
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 1.5e-07 59.7 103 39.8
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.0e-07 59.3 94 41.5
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 5.8e-07 57.8 95 41.1
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 5.8e-07 57.8 100 38.0
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 5.8e-07 57.8 101 45.5
MBI18_g27682_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 1.3e-06 56.6 103 38.8
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 3.8e-06 55.1 99 37.4
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 4.9e-06 54.7 98 40.8
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 4.9e-06 54.7 100 34.0
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 4.9e-06 54.7 100 38.0
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 8.4e-06 53.9 104 38.5


User provided reference genes

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