Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.3e-76 289.7 146 100.0
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.3e-76 289.7 146 100.0
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.2e-37 160.2 100 76.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.7e-37 157.5 120 66.7
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.0e-36 157.1 102 73.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.2e-35 152.1 120 64.2
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.1e-34 149.4 98 76.5
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 3.2e-11 72.4 64 53.1
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 3.2e-11 72.4 64 53.1
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 3.2e-11 72.4 79 44.3
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.5e-11 71.6 103 48.5
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 7.2e-11 71.2 59 59.3
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.2e-10 70.5 64 50.0
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 1.2e-10 70.5 64 50.0
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 3.6e-10 68.9 63 49.2
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 4.7e-10 68.6 67 49.3
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 6.1e-10 68.2 64 50.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-09 66.6 68 47.1
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 3.0e-09 65.9 85 52.9
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 4.0e-09 65.5 68 48.5
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 4.0e-09 65.5 64 48.4
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-08 63.2 61 49.2
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 5.7e-08 61.6 63 41.3
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 5.7e-08 61.6 84 40.5
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.5e-08 61.2 61 52.5
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 7.5e-08 61.2 62 46.8
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 9.7e-08 60.8 84 39.3
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 1.7e-07 60.1 67 43.3
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-07 59.7 62 45.2
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-07 59.3 62 43.5
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-07 59.3 62 43.5
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-07 58.9 61 49.2
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 3.7e-07 58.9 84 38.1
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 3.7e-07 58.9 58 46.6
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-07 58.9 68 42.6
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.7e-07 58.9 67 40.3
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.3e-07 58.2 62 43.5
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 6.3e-07 58.2 66 40.9
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-06 57.4 62 45.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-06 57.4 62 43.5
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.4e-06 57.0 62 43.5
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-06 56.6 62 45.2
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-06 56.2 86 40.7
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-06 56.2 62 45.2
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.4e-06 56.2 62 43.5
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-06 55.8 62 45.2
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 4.1e-06 55.5 59 42.4
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 4.1e-06 55.5 62 41.9
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 5.3e-06 55.1 62 43.5
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.3e-06 55.1 60 41.7


User provided reference genes

Program Settings