Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009532 Camellia sinensis var. sinensis HOM05D067542 ORTHO05D109516 5.2e-34 147.1 74 100.0
CSS0030538 Camellia sinensis var. sinensis HOM05D067542 ORTHO05D111818 2.7e-30 134.8 74 93.2
CSS0040568 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 6.5e-08 60.5 33 84.8
Dinv44102 Davidia involucrata HOM05D000522 ORTHO05D000565 8.4e-08 60.1 38 71.1
AUR62013705 Chenopodium quinoa HOM05D000522 ORTHO05D000565 1.4e-07 59.3 32 78.1
AUR62004144 Chenopodium quinoa HOM05D000522 ORTHO05D000565 5.5e-07 57.4 32 71.9
Ca_23121_v3 Cicer arietinum L. HOM05D001289 ORTHO05D000565 1.2e-06 56.2 28 85.7
TWI59G0792 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 1.2e-06 56.2 28 82.1
Nn1g00957 Nelumbo nucifera HOM05D000522 ORTHO05D000565 1.6e-06 55.8 28 82.1
Hund27389 Selenicereus undatus HOM05D000522 ORTHO05D000565 1.6e-06 55.8 28 82.1
GSVIVG01018212001 Vitis vinifera HOM05D000522 ORTHO05D000565 1.6e-06 55.8 28 82.1
Migut.B01570 Erythranthe guttata HOM05D000522 ORTHO05D000565 2.1e-06 55.5 28 78.6
Manes.05G051200 Manihot esculenta HOM05D000522 ORTHO05D000565 2.1e-06 55.5 38 65.8
Potri.014G057400 Populus trichocarpa HOM05D000522 ORTHO05D000565 2.1e-06 55.5 38 65.8
Psat4g208800 Pisum sativum HOM05D000522 ORTHO05D000565 2.7e-06 55.1 28 82.1
Sc26g0001370 Simmondsia chinensis HOM05D006089 ORTHO05D007345 2.7e-06 55.1 28 82.1
Eucgr.E01595 Eucalyptus grandis HOM05D000522 ORTHO05D000565 3.5e-06 54.7 38 63.2
MSTRG.20713 Avicennia marina HOM05D000522 ORTHO05D000565 4.6e-06 54.3 28 75.0
CANSAT21G0552 Cannabis sativa HOM05D000522 ORTHO05D000565 4.6e-06 54.3 38 63.2
ClCG05G016290 Citrullus lanatus HOM05D000522 ORTHO05D000565 4.6e-06 54.3 28 78.6
CsaV3_4G036550 Cucumis sativus L. HOM05D000522 ORTHO05D000565 4.6e-06 54.3 28 78.6
QL04p035366 Quercus lobata HOM05D000522 ORTHO05D000565 4.6e-06 54.3 34 67.6
Sed0012273 Sechium edule HOM05D000522 ORTHO05D000565 4.6e-06 54.3 28 78.6
TAR626G1465 Trochodendron aralioides HOM05D000522 ORTHO05D000565 4.6e-06 54.3 34 64.7
EL10Ac1g00813 Beta vulgaris HOM05D000522 ORTHO05D000565 6.0e-06 53.9 28 78.6
Eucgr.C02527 Eucalyptus grandis HOM05D000522 ORTHO05D000565 6.0e-06 53.9 34 67.6
Eucgr.C02613 Eucalyptus grandis HOM05D000522 ORTHO05D000565 6.0e-06 53.9 34 67.6
SGA_v2.0_scaffold153G36947 Striga asiatica HOM05D000522 ORTHO05D000565 6.0e-06 53.9 28 78.6
DCAR_003012 Daucus carota HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Glyma.03G117300 Glycine max HOM05D000522 ORTHO05D000565 7.9e-06 53.5 34 67.6
MBI04_g37585_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
SalBow5G1143 Salvia bowleyana HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 71.4
TAR629G0620 Trochodendron aralioides HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0


User provided reference genes

Program Settings