Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 1.3e-260 902.5 457 100.0
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 1.6e-178 629.8 480 73.1
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 6.6e-95 352.1 480 50.2
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 9.6e-70 268.5 434 45.6
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 1.8e-63 247.7 434 42.6
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 8.2e-53 212.2 595 33.3
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 2.8e-45 187.2 438 36.5
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 3.4e-43 180.3 423 34.3
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 4.4e-38 163.3 434 34.1
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 1.2e-35 155.2 419 32.0
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 2.6e-35 154.1 435 32.2
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.0e-34 152.1 432 33.1
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 2.9e-34 150.6 441 31.3
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 6.5e-34 149.4 399 32.1
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 2.3e-31 141.0 214 45.8
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 8.8e-31 139.0 418 31.3
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 1.7e-29 134.8 329 35.6
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 3.1e-28 130.6 463 30.7
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 3.1e-28 130.6 344 33.7
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 4.1e-28 130.2 419 31.7
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.5e-27 127.1 424 31.1
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 2.2e-26 124.4 445 30.8
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 3.8e-26 123.6 446 29.6
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 3.2e-25 120.6 408 28.2
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 5.5e-25 119.8 397 31.2
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 5.5e-25 119.8 445 29.7
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 9.4e-25 119.0 411 29.7
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 9.4e-25 119.0 352 30.7
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 2.1e-24 117.9 416 29.3
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.1e-24 117.9 415 30.8
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 2.7e-24 117.5 399 31.1
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 2.7e-24 117.5 399 31.1
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 2.7e-24 117.5 414 28.7
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 6.1e-24 116.3 472 28.6
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 7.5e-22 109.4 439 30.1
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 9.8e-22 109.0 406 29.6
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 9.8e-22 109.0 409 29.6
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 1.3e-21 108.6 393 30.8
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 2.8e-21 107.5 421 29.2
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 3.7e-21 107.1 438 30.1
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 6.3e-21 106.3 419 29.6
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 1.1e-20 105.5 426 27.2
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 1.2e-19 102.1 406 27.8
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 1.6e-19 101.7 327 32.1
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 7.7e-19 99.4 405 26.9
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 7.7e-19 99.4 414 29.0
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 7.7e-19 99.4 401 27.9
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 1.0e-18 99.0 411 28.0
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.7e-18 98.2 423 29.1
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 2.9e-18 97.4 394 27.9
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 8.6e-18 95.9 317 32.2
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 1.9e-17 94.7 420 29.5
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 2.5e-17 94.4 411 28.5
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 7.2e-17 92.8 308 29.9
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 4.7e-16 90.1 397 27.2
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 6.1e-16 89.7 404 26.5
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 8.0e-16 89.4 419 27.4
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 2.3e-15 87.8 422 26.8
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 3.0e-15 87.4 410 28.0
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 3.0e-15 87.4 405 27.4
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 4.0e-15 87.0 250 32.8
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 6.8e-15 86.3 404 27.0
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 8.9e-15 85.9 326 30.4
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 4.4e-14 83.6 405 27.2
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 5.7e-14 83.2 438 27.2
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.3e-13 82.0 433 28.4
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 2.8e-13 80.9 417 27.6
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 6.3e-13 79.7 408 27.5
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 1.1e-12 79.0 434 25.1
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 1.8e-12 78.2 408 27.7
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 1.8e-12 78.2 399 25.6
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 9.2e-12 75.9 299 27.1
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 9.2e-12 75.9 145 35.9
Actinidia10850 Actinidia chinensis HOM05D007047 ORTHO05D009177 2.0e-11 74.7 132 37.9
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 2.0e-11 74.7 429 24.7
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 3.5e-11 73.9 408 27.2
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 1.0e-10 72.4 404 26.7
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 1.7e-10 71.6 399 26.8
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 6.6e-10 69.7 186 33.3
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 1.1e-09 68.9 406 25.1
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 1.5e-09 68.6 411 26.5
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 1.2e-08 65.5 409 24.2
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 2.8e-08 64.3 156 32.7
FAN18G3895 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.8e-08 64.3 282 28.0
Sc07g0009150 Simmondsia chinensis HOM05D007047 ORTHO05D009177 1.8e-07 61.6 227 29.5
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 2.3e-07 61.2 474 23.8
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 3.1e-07 60.8 165 33.3
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 5.2e-07 60.1 421 25.7
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 6.8e-07 59.7 147 33.3
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 1.2e-06 58.9 323 27.9
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 2.6e-06 57.8 158 31.6
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 3.4e-06 57.4 398 25.9
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 7.5e-06 56.2 323 24.1
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 7.5e-06 56.2 410 26.6
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 7.5e-06 56.2 401 25.2
Ciclev10023353m.g Citrus clementina HOM05D007047 ORTHO05D009177 7.5e-06 56.2 147 27.9


User provided reference genes

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