Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.2e-270 933.7 450 100.0
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.7e-159 566.6 457 68.1
CSS0003893 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 9.9e-27 125.6 126 54.0
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 6.4e-26 122.9 243 35.8
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 5.4e-25 119.8 243 35.4
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 2.5e-22 110.9 209 37.8
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.8e-21 106.7 149 41.6
CSS0026714 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 3.1e-20 104.0 214 36.0
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.6e-19 100.9 147 39.5
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-19 100.9 241 32.0
CSS0006768 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 6.5e-18 96.3 213 35.7
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 6.5e-18 96.3 180 35.0
CSS0010442 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 7.1e-17 92.8 219 36.5
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.6e-16 91.7 122 40.2
CSS0023159 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 2.1e-16 91.3 236 33.5
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 7.4e-14 82.8 151 31.8
CSS0020711 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D006370 4.1e-12 77.0 86 39.5
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 5.0e-10 70.1 119 31.1
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 8.4e-10 69.3 76 46.1
CSS0042769 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D109009 1.2e-08 65.5 110 38.2
CSS0017728 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 1.6e-08 65.1 116 40.5
CSS0045948 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 1.6e-08 65.1 76 50.0
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 1.6e-08 65.1 198 25.8
CSS0001128 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D111383 2.1e-08 64.7 207 28.5
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 2.1e-08 64.7 63 44.4
CSS0003278 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.5e-08 63.9 74 47.3
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 3.5e-08 63.9 131 29.8
CSS0022480 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 1.0e-07 62.4 116 39.7
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 1.8e-07 61.6 131 29.8
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 3.0e-07 60.8 123 30.9
CSS0025609 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D112288 3.9e-07 60.5 86 45.3
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 3.9e-07 60.5 108 26.9
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 3.9e-07 60.5 98 32.7
CSS0026648 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 5.1e-07 60.1 90 43.3
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 5.1e-07 60.1 62 45.2
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 5.1e-07 60.1 120 31.7
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.7e-07 59.7 113 31.9
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 8.7e-07 59.3 122 27.9
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 1.1e-06 58.9 100 29.0
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-06 58.9 77 35.1
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.5e-06 58.5 128 28.9
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 2.5e-06 57.8 86 34.9
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.3e-06 57.0 79 34.2


User provided reference genes

Program Settings