Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.5e-127 459.5 228 100.0
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 2.5e-103 379.0 226 83.6
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 3.8e-99 365.2 226 80.5
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 4.2e-98 361.7 259 72.6
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 6.9e-93 344.4 230 76.5
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 1.2e-92 343.6 230 76.1
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 1.5e-92 343.2 227 74.9
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 2.0e-92 342.8 228 75.0
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 2.6e-92 342.4 228 75.0
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 4.9e-91 338.2 230 76.1
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 1.2e-89 333.6 217 78.3
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 2.7e-89 332.4 209 78.5
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 3.5e-89 332.0 222 75.2
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 1.8e-88 329.7 231 72.7
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 3.0e-88 328.9 222 74.3
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 1.1e-87 327.0 232 73.3
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 3.3e-87 325.5 203 78.3
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 4.3e-87 325.1 225 74.7
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 1.6e-86 323.2 224 73.2
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 6.2e-86 321.2 198 80.3
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 2.4e-85 319.3 231 73.2
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 4.0e-85 318.5 203 78.3
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 6.9e-85 317.8 218 74.3
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 6.9e-85 317.8 226 70.4
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 2.0e-84 316.2 223 72.2
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 7.6e-84 314.3 207 76.3
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 1.0e-83 313.9 188 79.3
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 1.3e-83 313.5 202 77.2
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 1.7e-83 313.2 188 81.4
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 4.9e-83 311.6 202 76.7
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 6.5e-83 311.2 209 74.2
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 6.5e-83 311.2 217 72.8
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 8.4e-83 310.8 218 73.9
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 8.4e-83 310.8 184 82.1
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 1.4e-82 310.1 257 65.0
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 2.5e-82 309.3 192 79.2
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 5.5e-82 308.1 222 72.1
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 9.3e-82 307.4 218 73.4
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 1.6e-81 306.6 188 79.8
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 2.1e-81 306.2 226 67.7
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 2.1e-81 306.2 210 70.5
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 4.6e-81 305.1 229 70.7
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 1.3e-80 303.5 231 70.6
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 1.8e-80 303.1 181 81.2
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 2.3e-80 302.8 190 77.9
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 2.3e-80 302.8 213 71.4
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 3.0e-80 302.4 185 77.8
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 5.1e-80 301.6 219 72.6
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 5.1e-80 301.6 225 65.8
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 6.7e-80 301.2 207 73.4
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 8.7e-80 300.8 248 65.7
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 1.9e-79 299.7 213 71.4
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 1.9e-79 299.7 211 73.0
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 3.3e-79 298.9 210 70.5
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 5.7e-79 298.1 210 74.3
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 5.7e-79 298.1 211 70.1
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 7.4e-79 297.7 213 70.4
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 9.7e-79 297.4 213 70.4
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 1.3e-78 297.0 213 70.4
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 1.3e-78 297.0 223 68.2
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 2.8e-78 295.8 213 68.1
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 2.8e-78 295.8 242 64.5
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 3.7e-78 295.4 217 69.1
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 3.7e-78 295.4 226 69.0
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 4.8e-78 295.0 213 70.0
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 4.8e-78 295.0 216 69.4
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 1.8e-77 293.1 200 70.5
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 5.3e-77 291.6 225 66.7
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 6.9e-77 291.2 202 71.3
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 1.5e-76 290.0 220 67.7
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 1.5e-76 290.0 226 67.3
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 4.5e-76 288.5 212 68.4
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 8.5e-75 284.3 236 62.7
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 1.9e-74 283.1 236 62.3
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 1.9e-74 283.1 216 66.2
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 2.5e-74 282.7 179 74.9
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 5.5e-74 281.6 230 63.0
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 2.7e-73 279.3 202 71.8
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 2.0e-71 273.1 211 67.3
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 3.7e-70 268.9 233 61.8
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 4.8e-70 268.5 243 59.3
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 9.1e-69 264.2 179 73.2
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.3e-67 260.4 179 70.9
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 3.8e-67 258.8 213 61.5
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 1.9e-66 256.5 191 64.4
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 5.5e-66 255.0 161 75.2
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 9.4e-66 254.2 197 65.0
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 1.1e-63 247.3 181 66.3
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.0e-63 246.5 223 60.1
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 2.2e-62 243.0 190 60.5
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 9.1e-61 237.7 236 55.5
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 2.7e-57 226.1 164 67.7
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 1.0e-56 224.2 122 86.1
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 3.0e-56 222.6 159 70.4
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 1.5e-55 220.3 236 56.4
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 9.7e-55 217.6 218 58.7
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 3.1e-53 212.6 183 57.4
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.2e-52 210.7 105 100.0
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 2.0e-47 193.4 123 74.0
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 7.0e-45 184.9 97 87.6
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 1.3e-43 180.6 155 59.4
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 2.5e-42 176.4 96 84.4
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 3.2e-42 176.0 98 83.7
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 3.4e-39 166.0 210 43.3
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.5e-36 156.0 222 44.6
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 4.7e-33 145.6 107 72.0
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 5.7e-31 138.7 148 45.9
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.4e-29 133.3 114 61.4
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 1.3e-22 110.9 65 80.0
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 3.5e-20 102.8 84 60.7
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 1.4e-16 90.9 72 61.1
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 2.6e-15 86.7 70 62.9
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 1.7e-14 84.0 54 75.9
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 6.4e-14 82.0 56 67.9
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 4.1e-13 79.3 49 71.4
CDE04G1482 Ceratophyllum demersum HOM05D006526 ORTHO05D003215 3.1e-08 63.2 58 55.2
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 6.8e-08 62.0 144 27.8
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 1.5e-07 60.8 173 29.5
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 3.4e-07 59.7 133 30.1
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 3.4e-07 59.7 144 28.5
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 7.6e-07 58.5 143 26.6
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 7.6e-07 58.5 142 28.9
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 9.9e-07 58.2 146 27.4
QL06p007766 Quercus lobata HOM05D006526 ORTHO05D008496 9.9e-07 58.2 41 65.9
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 1.3e-06 57.8 145 27.6
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 1.3e-06 57.8 128 28.1
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 2.2e-06 57.0 181 26.5
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 2.2e-06 57.0 126 31.7
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.9e-06 56.6 145 27.6
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 2.9e-06 56.6 145 27.6
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 2.9e-06 56.6 144 27.8
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 2.9e-06 56.6 150 26.7
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 3.7e-06 56.2 144 27.8
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.7e-06 56.2 147 29.3
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 3.7e-06 56.2 144 27.1
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 4.9e-06 55.8 146 30.1
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 4.9e-06 55.8 145 26.9
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 6.4e-06 55.5 144 27.1
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 6.4e-06 55.5 145 27.6
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 6.4e-06 55.5 145 27.6
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 6.4e-06 55.5 141 28.4
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 6.4e-06 55.5 141 29.1
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 8.4e-06 55.1 222 27.5
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 8.4e-06 55.1 123 31.7
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 8.4e-06 55.1 144 29.2
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 8.4e-06 55.1 143 30.8
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 8.4e-06 55.1 147 29.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 8.4e-06 55.1 143 27.3


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