Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009451 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.6e-54 216.9 140 100.0
CSS0018723 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 6.5e-53 211.5 140 95.0
CSS0020656 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 7.7e-46 188.0 140 76.4
Rhsim03G0013500 Rhododendron simsii HOM05D003506 ORTHO05D004063 2.4e-31 139.8 144 63.2
Rhsim03G0013200 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.1e-31 139.4 144 63.2
Actinidia26982 Actinidia chinensis HOM05D003506 ORTHO05D004063 9.2e-31 137.9 145 69.7
Rhsim03G0013700 Rhododendron simsii HOM05D003506 ORTHO05D004063 2.1e-27 126.7 144 59.7
CSS0045089 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 3.6e-27 125.9 68 89.7
Rhsim03G0012900 Rhododendron simsii HOM05D003506 ORTHO05D004063 5.2e-26 122.1 144 58.3
Rhsim03G0054300 Rhododendron simsii HOM05D003506 ORTHO05D004063 6.8e-26 121.7 120 57.5
Actinidia11819 Actinidia chinensis HOM05D003506 ORTHO05D004063 7.0e-23 111.7 116 51.7
CSS0021977 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.6e-22 110.5 117 64.1
CSS0044487 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.7e-22 109.8 141 43.3
Cc10_g11570 Coffea canephora HOM05D003506 ORTHO05D004063 6.2e-19 98.6 118 47.5
Cc08_g04830 Coffea canephora HOM05D003506 ORTHO05D004063 1.0e-18 97.8 118 47.5
Cc00_g33500 Coffea canephora HOM05D003506 ORTHO05D004063 2.3e-18 96.7 101 50.5
Hma1.2p1_2475F.1_g322790 Hydrangea macrophylla HOM05D003506 ORTHO05D004063 2.6e-17 93.2 145 57.2
RhsimUnG0207500 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.4e-17 92.8 118 64.4
Cc00_g22760 Coffea canephora HOM05D003506 ORTHO05D004063 2.4e-15 86.7 113 46.0
CSS0001701 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.7e-14 83.2 128 41.4
Lj1A1215T59 Lonicera japonica HOM05D003506 ORTHO05D004063 2.7e-14 83.2 116 39.7
Prupe.7G078000 Prunus persica HOM05D003506 ORTHO05D004063 4.6e-14 82.4 110 47.3
Prupe.7G078200 Prunus persica HOM05D003506 ORTHO05D004063 4.6e-14 82.4 110 47.3
Atru.chr2.1012 Acer truncatum HOM05D003506 ORTHO05D004063 5.0e-13 79.0 115 42.6
FvH4_6g22120 Fragaria vesca HOM05D003506 ORTHO05D004063 5.0e-13 79.0 116 42.2
FAN14G0755 Fragaria x ananassa HOM05D003506 ORTHO05D004063 5.0e-13 79.0 116 42.2
Cc05_g09100 Coffea canephora HOM05D003506 ORTHO05D004063 6.6e-13 78.6 118 42.4
MD14G1055300 Malus domestica HOM05D003506 ORTHO05D004063 2.5e-12 76.6 99 43.4
Lj2C372T7 Lonicera japonica HOM05D003506 ORTHO05D004063 1.2e-11 74.3 118 39.0
TWI60G1006 Tripterygium wilfordii HOM05D003506 ORTHO05D004063 1.2e-11 74.3 140 35.7
Cpa.g.c37786 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-11 72.0 117 39.3
Cpa.g.sc727.3 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-11 72.0 117 40.2
Cc08_g04930 Coffea canephora HOM05D003506 ORTHO05D004063 6.2e-11 72.0 71 56.3
Lsat_1_v5_gn_1_124100 Lactuca sativa HOM05D003506 ORTHO05D004063 1.4e-10 70.9 108 39.8
Cpa.g.sc47.17 Carica papaya HOM05D003506 ORTHO05D004063 3.1e-10 69.7 108 38.0
DCAR_013527 Daucus carota HOM05D003506 ORTHO05D004063 6.8e-10 68.6 109 40.4
Cpa.g.sc27.151 Carica papaya HOM05D003506 ORTHO05D004063 8.9e-10 68.2 117 37.6
Cpa.g.sc27.145 Carica papaya HOM05D003506 ORTHO05D004063 2.0e-09 67.0 117 38.5
DCAR_009112 Daucus carota HOM05D003506 ORTHO05D004063 3.4e-09 66.2 112 34.8
Cpa.g.sc27.148 Carica papaya HOM05D003506 ORTHO05D004063 4.4e-09 65.9 117 35.9
ECA248G2101 Erigeron canadensis HOM05D003506 ORTHO05D004063 4.4e-09 65.9 104 40.4
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 4.4e-09 65.9 117 40.2
Thecc.03G312300 Theobroma cacao HOM05D003506 ORTHO05D004063 4.4e-09 65.9 69 55.1
QL12p010090 Quercus lobata HOM05D003506 ORTHO05D004063 5.8e-09 65.5 112 38.4
Cpa.g.sc27.143 Carica papaya HOM05D003506 ORTHO05D004063 7.5e-09 65.1 117 37.6
MELO3C005504.2 Cucumis melo HOM05D003506 ORTHO05D004063 7.5e-09 65.1 118 36.4
CANSAT21G2366 Cannabis sativa HOM05D003506 ORTHO05D004063 9.8e-09 64.7 117 35.0
Cpa.g.sc27.154 Carica papaya HOM05D003506 ORTHO05D004063 9.8e-09 64.7 117 37.6
CsaV3_5G004570 Cucumis sativus L. HOM05D003506 ORTHO05D004063 1.3e-08 64.3 118 36.4
Haze_19427 Corylus avellana HOM05D003506 ORTHO05D004063 1.7e-08 63.9 114 40.4
Dinv40460 Davidia involucrata HOM05D003506 ORTHO05D004063 1.7e-08 63.9 126 37.3
Potri.003G101000 Populus trichocarpa HOM05D003506 ORTHO05D004063 1.7e-08 63.9 116 36.2
QL12p009920 Quercus lobata HOM05D003506 ORTHO05D004063 1.7e-08 63.9 111 36.0
Aqoxy1G04209 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 2.2e-08 63.5 144 36.1
CiPaw.11G083500 Carya illinoinensis HOM05D003506 ORTHO05D004063 3.7e-08 62.8 94 42.6
Sed0023391 Sechium edule HOM05D003506 ORTHO05D004063 3.7e-08 62.8 103 38.8
Aqoxy1G04135 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 4.9e-08 62.4 139 35.3
QL12p010549 Quercus lobata HOM05D003506 ORTHO05D004063 4.9e-08 62.4 100 52.0
THA.LOC104806185 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 4.9e-08 62.4 99 37.4
CAN.G641.75 Capsicum annuum HOM05D003506 ORTHO05D004063 6.4e-08 62.0 95 37.9
QL12p010199 Quercus lobata HOM05D003506 ORTHO05D004063 8.3e-08 61.6 111 35.1
Aqoxy4G00434 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 1.1e-07 61.2 120 41.7
Haze_19428 Corylus avellana HOM05D003506 ORTHO05D004063 1.1e-07 61.2 116 39.7
MBI18_g46344_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.1e-07 61.2 94 39.4
CAN.G641.64 Capsicum annuum HOM05D003506 ORTHO05D004063 1.4e-07 60.8 95 36.8
Cpa.g.c48019 Carica papaya HOM05D003506 ORTHO05D004063 1.4e-07 60.8 117 34.2
QL12p009886 Quercus lobata HOM05D003506 ORTHO05D004063 1.4e-07 60.8 100 51.0
MBI18_g07919_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.9e-07 60.5 94 39.4
Aqoxy4G00435 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 5.4e-07 58.9 120 40.0
Cfa001535 Carpinus fangiana HOM05D003506 ORTHO05D004063 7.1e-07 58.5 115 40.0
CANSAT56G2852 Cannabis sativa HOM05D003506 ORTHO05D004063 9.2e-07 58.2 113 31.9
Cfa001536 Carpinus fangiana HOM05D003506 ORTHO05D004063 1.6e-06 57.4 87 42.5
Nn1g03848 Nelumbo nucifera HOM05D003506 ORTHO05D004063 2.1e-06 57.0 63 47.6
Gohir.A08G152600 Gossypium hirsutum HOM05D003506 ORTHO05D004063 2.7e-06 56.6 61 50.8
Gohir.D08G173500 Gossypium hirsutum HOM05D003506 ORTHO05D004063 3.5e-06 56.2 61 50.8
Gorai.004G181200 Gossypium raimondii HOM05D003506 ORTHO05D004063 3.5e-06 56.2 61 50.8
Lsat_1_v5_gn_1_123181 Lactuca sativa HOM05D003506 ORTHO05D004063 4.6e-06 55.8 62 48.4
Aqoxy1G02153 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 6.0e-06 55.5 111 40.5
Ciclev10033967m.g Citrus clementina HOM05D003506 ORTHO05D004063 6.0e-06 55.5 120 31.7
Duzib205G1851 Durio zibethinus HOM05D003506 ORTHO05D004063 6.0e-06 55.5 52 51.9


User provided reference genes

Program Settings