Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009433 Camellia sinensis var. sinensis HOM05D030793 ORTHO05D013043 1.2e-73 280.4 218 100.0
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-31 138.3 69 94.2
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-27 127.5 69 82.6
CSS0042765 Camellia sinensis var. sinensis HOM05D014314 ORTHO05D000047 2.0e-25 120.2 251 37.5
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.2e-22 110.9 64 75.0
CSS0048496 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-22 109.0 60 81.7
CSS0008068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.4e-20 102.4 68 66.2
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-19 100.5 68 64.7
CSS0049066 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.2e-16 90.1 142 49.3
CSS0048289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.4e-13 80.9 65 60.0
CSS0005797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-13 80.5 134 42.5
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 9.7e-12 74.7 47 72.3
CSS0032610 Camellia sinensis var. sinensis HOM05D020206 ORTHO05D000047 1.7e-11 73.9 127 37.0
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.2e-11 71.6 37 91.9
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-10 71.2 174 38.5
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-10 70.9 147 31.3
CSS0026947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.1e-10 69.3 131 38.2
Aqoxy7G01998 Aquilegia oxysepala HOM05D000002 ORTHO05D000047 2.0e-09 67.0 68 42.6
CSS0013220 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-09 66.2 48 64.6
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.0e-08 64.7 69 39.1
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 1.0e-08 64.7 69 39.1
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 1.0e-08 64.7 69 39.1
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.5 69 43.5
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.5 69 43.5
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.5 69 43.5
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.5 69 43.5
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.5 69 43.5
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 3.8e-08 62.8 64 45.3
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 62.0 69 42.0
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 8.5e-08 61.6 99 40.4
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.1e-07 61.2 40 80.0
CSS0028950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.5e-07 60.8 35 80.0
CSS0027343 Camellia sinensis var. sinensis HOM05D030793 ORTHO05D000047 3.2e-07 59.7 90 38.9
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-07 58.9 69 34.8
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 5.5e-07 58.9 74 33.8
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.4e-07 58.2 73 37.0
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 1.2e-06 57.8 64 40.6
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.6e-06 57.4 40 75.0
CSS0043807 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.0 35 85.7
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-06 56.6 70 37.1
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.1e-06 55.5 68 39.7
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 6.1e-06 55.5 69 31.9
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 8.0e-06 55.1 50 56.0
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 8.0e-06 55.1 67 38.8
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.0e-06 55.1 64 39.1


User provided reference genes

Program Settings