Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 5.7e-89 330.9 164 100.0
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.5e-65 253.1 169 79.9
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 3.6e-51 205.3 163 67.5
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 1.2e-43 180.3 165 59.4
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 8.6e-37 157.5 174 51.1
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 3.6e-35 152.1 174 49.4
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 1.2e-33 147.1 174 47.7
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 5.8e-33 144.8 163 50.3
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 2.2e-32 142.9 168 49.4
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 2.2e-32 142.9 163 50.3
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 2.7e-30 136.0 164 47.6
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 7.3e-28 127.9 164 47.0
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 2.8e-27 125.9 163 47.2
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 3.6e-27 125.6 164 46.3
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 2.3e-26 122.9 163 45.4
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 3.1e-26 122.5 164 47.6
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 2.0e-25 119.8 172 43.6
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 2.6e-25 119.4 163 43.6
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 5.8e-25 118.2 167 44.9
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 4.6e-22 108.6 166 45.2
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 2.3e-21 106.3 150 45.3
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 3.9e-21 105.5 149 45.0
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 5.1e-21 105.1 166 42.8
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 2.8e-19 99.4 147 40.8
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 5.1e-13 78.6 141 37.6
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 1.9e-12 76.6 142 33.8
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 3.3e-12 75.9 147 38.8
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 1.1e-07 60.8 100 42.0


User provided reference genes

Program Settings