Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 3.7e-91 338.2 171 100.0
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 3.3e-71 271.9 177 80.2
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 3.9e-56 221.9 132 86.4
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 4.9e-35 151.8 136 63.2
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.7e-32 143.3 137 59.9
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 1.1e-29 134.0 139 55.4
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 1.8e-29 133.3 136 57.4
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 6.9e-29 131.3 135 57.0
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 2.6e-28 129.4 138 56.5
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 1.3e-27 127.1 139 56.8
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 1.3e-27 127.1 139 56.8
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 6.4e-27 124.8 135 54.1
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 2.4e-26 122.9 135 52.6
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 3.2e-26 122.5 136 54.4
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 2.1e-25 119.8 135 52.6
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.1e-25 119.8 135 51.9
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 2.7e-25 119.4 139 52.5
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 2.7e-25 119.4 135 49.6
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 2.7e-25 119.4 141 53.2
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 3.5e-25 119.0 133 54.1
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 3.5e-25 119.0 146 53.4
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 6.0e-25 118.2 141 51.8
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 7.9e-25 117.9 137 54.0
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 1.0e-24 117.5 139 52.5
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 1.3e-24 117.1 150 52.7
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 2.3e-24 116.3 147 50.3
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 3.0e-24 115.9 145 47.6
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 3.0e-24 115.9 144 50.0
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 3.9e-24 115.5 133 53.4
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 3.9e-24 115.5 147 51.0
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.9e-24 115.5 147 51.0
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 3.9e-24 115.5 150 50.7
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 6.7e-24 114.8 145 48.3
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 6.7e-24 114.8 133 51.1
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 6.7e-24 114.8 137 51.8
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 1.5e-23 113.6 139 51.8
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 1.5e-23 113.6 135 49.6
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 1.9e-23 113.2 143 51.7
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 2.5e-23 112.8 140 53.6
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 4.3e-23 112.1 140 50.7
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 5.6e-23 111.7 139 51.8
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 7.4e-23 111.3 144 49.3
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 9.6e-23 110.9 139 49.6
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 9.6e-23 110.9 133 53.4
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 1.3e-22 110.5 136 50.7
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 1.3e-22 110.5 144 48.6
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 2.1e-22 109.8 133 51.1
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 2.1e-22 109.8 138 52.2
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 3.7e-22 109.0 135 49.6
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 3.7e-22 109.0 135 50.4
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 8.1e-22 107.8 136 50.7
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 1.4e-21 107.1 134 48.5
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 1.8e-21 106.7 72 72.2
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 1.8e-21 106.7 144 50.7
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 1.8e-21 106.7 140 51.4
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 1.8e-21 106.7 141 50.4
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 1.8e-21 106.7 141 50.4
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 2.4e-21 106.3 141 50.4
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 3.1e-21 105.9 72 73.6
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 4.0e-21 105.5 145 48.3
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 4.0e-21 105.5 140 50.7
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 4.0e-21 105.5 132 50.0
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 5.3e-21 105.1 123 54.5
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 6.9e-21 104.8 148 47.3
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 6.9e-21 104.8 156 46.2
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 9.0e-21 104.4 134 49.3
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 9.0e-21 104.4 145 46.2
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 9.0e-21 104.4 142 47.2
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 1.2e-20 104.0 132 52.3
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 1.5e-20 103.6 134 50.7
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 2.0e-20 103.2 148 45.3
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 2.6e-20 102.8 146 45.9
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 3.4e-20 102.4 138 47.1
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 5.8e-20 101.7 139 46.8
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 5.8e-20 101.7 134 46.3
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 5.8e-20 101.7 151 43.7
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 7.6e-20 101.3 151 47.0
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 1.0e-19 100.9 159 42.8
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 1.0e-19 100.9 141 48.2
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 1.7e-19 100.1 163 44.8
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 1.4e-18 97.1 135 45.2
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 1.9e-18 96.7 142 44.4
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 1.9e-18 96.7 135 45.2
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 2.5e-18 96.3 150 42.7
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 3.2e-18 95.9 135 45.9
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 3.2e-18 95.9 135 45.9
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 5.5e-18 95.1 158 42.4
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 1.2e-17 94.0 134 45.5
SGA_v2.0_scaffold52G18911 Striga asiatica HOM05D006959 ORTHO05D008808 1.6e-17 93.6 126 46.0
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 6.0e-17 91.7 74 64.9
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 7.9e-17 91.3 63 69.8
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 7.9e-17 91.3 130 44.6
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 1.0e-16 90.9 129 46.5
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 3.0e-16 89.4 138 40.6
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 6.7e-16 88.2 139 38.8
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 2.5e-15 86.3 147 42.2
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 2.8e-14 82.8 138 39.9
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 8.2e-14 81.3 62 62.9
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 1.4e-13 80.5 124 45.2
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 2.9e-11 72.8 40 82.5
FAN24G1784 Fragaria x ananassa HOM05D006959 ORTHO05D008808 2.7e-09 66.2 44 68.2
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.9e-07 60.1 30 93.3


User provided reference genes

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