Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009414 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 6.3e-60 233.8 110 100.0
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.4e-30 136.3 73 86.3
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 2.0e-29 132.5 68 88.2
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.6e-29 132.1 61 98.4
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 2.2e-28 129.0 73 83.6
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 3.2e-27 125.2 73 78.1
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 9.2e-27 123.6 68 83.8
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 4.6e-26 121.3 62 87.1
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 4.6e-26 121.3 61 88.5
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 6.0e-26 120.9 73 75.3
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 6.0e-26 120.9 64 85.9
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 7.8e-26 120.6 61 90.2
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 7.8e-26 120.6 60 90.0
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 1.3e-25 119.8 61 86.9
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 1.3e-25 119.8 61 86.9
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.7e-25 119.4 59 89.8
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 2.3e-25 119.0 61 86.9
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 2.3e-25 119.0 61 90.2
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 2.3e-25 119.0 62 87.1
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 3.0e-25 118.6 61 85.2
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 3.9e-25 118.2 61 88.5
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 3.9e-25 118.2 61 86.9
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 5.1e-25 117.9 61 85.2
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 5.1e-25 117.9 61 86.9
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 5.1e-25 117.9 61 88.5
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 6.6e-25 117.5 61 83.6
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 8.6e-25 117.1 61 86.9
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 8.6e-25 117.1 61 86.9
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.1e-24 116.7 61 85.2
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 1.1e-24 116.7 62 85.5
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.1e-24 116.7 61 86.9
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 1.5e-24 116.3 62 83.9
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.5e-24 116.3 59 88.1
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.5e-24 116.3 61 86.9
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.5e-24 116.3 59 86.4
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 1.5e-24 116.3 59 88.1
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.5e-24 116.3 73 75.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 2.5e-24 115.5 61 83.6
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 2.5e-24 115.5 61 85.2
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 3.3e-24 115.2 61 86.9
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 3.3e-24 115.2 59 86.4
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 3.3e-24 115.2 59 86.4
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 4.3e-24 114.8 61 85.2
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 5.6e-24 114.4 57 91.2
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 5.6e-24 114.4 57 91.2
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 9.5e-24 113.6 61 80.3
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.6e-23 112.8 60 83.3
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.6e-23 112.8 59 86.4
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.6e-23 112.8 59 86.4
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 2.1e-23 112.5 70 71.4
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 2.1e-23 112.5 61 82.0
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 2.8e-23 112.1 61 82.0
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.8e-23 112.1 61 82.0
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.8e-23 112.1 61 82.0
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.8e-23 112.1 61 82.0
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.8e-23 112.1 61 82.0
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 2.8e-23 112.1 57 89.5
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 3.6e-23 111.7 61 80.3
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 3.6e-23 111.7 61 85.2
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.6e-23 111.7 60 85.0
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 4.7e-23 111.3 61 82.0
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 4.7e-23 111.3 64 81.2
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 4.7e-23 111.3 61 82.0
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 6.2e-23 110.9 59 83.1
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 6.2e-23 110.9 59 84.7
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 6.2e-23 110.9 61 83.6
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 8.1e-23 110.5 61 83.6
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.4e-22 109.8 59 84.7
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 1.8e-22 109.4 61 82.0
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.8e-22 109.4 61 83.6
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 4.0e-22 108.2 61 80.3
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 4.0e-22 108.2 64 78.1
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 5.2e-22 107.8 59 83.1
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 5.2e-22 107.8 57 86.0
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 6.8e-22 107.5 57 86.0
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 6.8e-22 107.5 61 78.7
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 6.8e-22 107.5 61 78.7
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 8.9e-22 107.1 57 86.0
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 2.0e-21 105.9 61 78.7
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 2.6e-21 105.5 61 75.4
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 4.4e-21 104.8 60 76.7
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 4.4e-21 104.8 61 78.7
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 7.6e-21 104.0 61 77.0
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 9.9e-21 103.6 57 80.7
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 1.3e-20 103.2 61 73.8
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.3e-20 103.2 62 77.4
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 1.7e-20 102.8 60 76.7
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 1.7e-20 102.8 60 76.7
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 1.7e-20 102.8 61 75.4
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.2e-20 102.4 61 73.8
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 2.2e-20 102.4 58 81.0
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 3.8e-20 101.7 60 75.0
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 3.8e-20 101.7 56 75.0
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 3.8e-20 101.7 61 75.4
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 4.9e-20 101.3 60 76.7
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 8.4e-20 100.5 59 78.0
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 8.4e-20 100.5 60 76.7
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 1.9e-19 99.4 59 76.3
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 1.9e-19 99.4 60 75.0
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 2.4e-19 99.0 59 76.3
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 2.4e-19 99.0 59 76.3
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 2.4e-19 99.0 59 76.3
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 3.2e-19 98.6 61 73.8
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 5.4e-19 97.8 61 73.8
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 2.1e-18 95.9 60 70.0
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 4.6e-18 94.7 66 66.7
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 1.0e-17 93.6 64 67.2
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 8.7e-17 90.5 64 67.2
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 6.4e-12 74.3 73 46.6


User provided reference genes

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