Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 6.7e-108 394.0 200 100.0
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.9e-95 351.3 200 92.5
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 4.6e-77 291.6 200 77.0
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 4.4e-75 285.0 193 78.2
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 4.8e-74 281.6 199 73.9
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 8.5e-71 270.8 189 72.5
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 1.1e-70 270.4 192 72.9
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 4.2e-70 268.5 191 71.7
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 7.2e-70 267.7 194 71.1
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 9.4e-70 267.3 194 73.7
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 7.9e-69 264.2 196 73.5
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.0e-68 263.8 188 72.3
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 1.4e-68 263.5 193 72.5
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 3.9e-68 261.9 189 70.9
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 5.2e-68 261.5 192 70.8
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 6.7e-68 261.2 186 73.1
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.0e-67 259.6 198 68.7
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 3.3e-67 258.8 196 68.4
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 5.7e-67 258.1 194 68.0
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 1.7e-66 256.5 188 70.7
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 6.3e-66 254.6 196 67.9
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 1.4e-65 253.4 192 67.2
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.8e-65 253.1 191 69.6
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.8e-65 253.1 187 69.5
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 2.4e-65 252.7 187 69.5
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 5.3e-65 251.5 191 67.5
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 5.3e-65 251.5 193 67.4
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 4.5e-64 248.4 187 67.9
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 3.8e-63 245.4 198 65.7
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 3.8e-63 245.4 189 67.2
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 5.0e-63 245.0 190 67.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 5.0e-63 245.0 194 64.4
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 8.5e-63 244.2 200 66.5
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.9e-62 243.0 181 69.6
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 2.5e-62 242.7 191 64.9
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 2.5e-62 242.7 194 64.4
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 3.2e-62 242.3 190 63.7
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 5.5e-62 241.5 192 65.6
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.6e-61 240.0 199 63.3
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.1e-61 239.6 189 66.1
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 2.1e-61 239.6 190 64.2
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.7e-61 239.2 189 65.6
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 2.7e-61 239.2 191 66.5
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 4.7e-61 238.4 185 66.5
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 4.7e-61 238.4 188 68.6
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 6.1e-61 238.0 201 64.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 2.3e-60 236.1 188 66.0
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 3.0e-60 235.7 195 62.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 3.0e-60 235.7 188 62.8
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 6.7e-60 234.6 188 63.8
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 3.3e-59 232.3 192 62.5
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 4.4e-59 231.9 183 64.5
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 4.4e-59 231.9 193 60.1
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 4.4e-59 231.9 183 66.7
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 7.5e-59 231.1 192 62.5
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 2.2e-58 229.6 188 62.2
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 2.2e-58 229.6 189 63.5
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 2.2e-58 229.6 190 62.6
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 4.8e-58 228.4 192 62.5
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 4.8e-58 228.4 192 62.0
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 6.3e-58 228.0 192 62.0
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 4.1e-57 225.3 188 61.2
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 7.0e-57 224.6 193 62.2
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 7.0e-57 224.6 193 62.2
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 7.0e-57 224.6 186 62.4
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 9.1e-57 224.2 187 63.1
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 1.2e-56 223.8 192 62.0
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 1.6e-56 223.4 183 63.4
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.6e-56 223.4 193 61.7
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.6e-56 223.4 193 61.7
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 2.0e-56 223.0 222 57.2
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 4.5e-56 221.9 192 59.9
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 2.9e-55 219.2 188 61.2
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 1.2e-53 213.8 161 67.7
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 1.6e-53 213.4 180 61.1
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 1.0e-52 210.7 157 68.8
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 1.0e-52 210.7 180 60.6
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.0e-52 210.7 179 63.1
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.4e-52 210.3 139 72.7
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.8e-52 209.9 185 57.8
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 2.3e-52 209.5 267 49.4
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 4.0e-52 208.8 155 69.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.6e-51 206.1 163 67.5
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 3.4e-51 205.7 179 60.9
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 2.2e-50 203.0 140 75.0
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 2.8e-50 202.6 181 60.2
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 4.8e-50 201.8 182 59.9
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 5.4e-49 198.4 139 71.2
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.2e-48 197.2 177 59.3
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 4.5e-48 195.3 158 63.9
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 2.9e-47 192.6 184 53.8
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 1.5e-46 190.3 117 80.3
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 1.9e-46 189.9 192 53.1
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 3.3e-46 189.1 137 69.3
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.4e-41 173.7 221 46.6
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.0e-40 169.9 152 60.5
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 2.5e-38 162.9 123 66.7
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.5e-38 162.9 187 47.1
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 7.3e-38 161.4 153 59.5
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 7.3e-38 161.4 185 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 1.2e-37 160.6 183 45.4
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 1.3e-34 150.6 156 51.3
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.7e-31 140.2 180 42.2
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 8.9e-28 127.9 89 73.0
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.7e-26 123.6 130 50.8
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 3.5e-16 89.4 78 62.8
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.1e-14 84.3 66 65.2
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 4.3e-14 82.4 166 31.9
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.3e-10 70.9 44 72.7
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 2.2e-10 70.1 97 47.4
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.4e-09 66.6 68 57.4


User provided reference genes

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