Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009297 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.4e-127 458.8 221 100.0
CSS0007057 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.7e-110 402.1 234 85.5
CSS0011520 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 5.0e-56 221.9 176 70.5
CSS0036835 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 5.0e-56 221.9 176 70.5
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 2.7e-49 199.5 176 63.6
ECA246G2798 Erigeron canadensis HOM05D005342 ORTHO05D006925 1.3e-48 197.2 176 60.8
CANSAT35G0196 Cannabis sativa HOM05D005342 ORTHO05D006925 2.2e-48 196.4 176 62.5
HanXRQChr05g0148741 Helianthus annuus HOM05D005342 ORTHO05D006925 2.9e-48 196.1 176 60.2
Dinv11757 Davidia involucrata HOM05D005342 ORTHO05D006925 1.9e-47 193.4 175 62.3
Hund19384 Selenicereus undatus HOM05D005342 ORTHO05D006925 1.9e-47 193.4 176 61.9
Lj2A343T76 Lonicera japonica HOM05D005342 ORTHO05D006925 3.2e-47 192.6 158 65.8
Thecc.02G004100 Theobroma cacao HOM05D005342 ORTHO05D006925 4.2e-47 192.2 176 62.5
Gorai.002G218700 Gossypium raimondii HOM05D005342 ORTHO05D006925 7.2e-47 191.4 176 61.9
QL11p012260 Quercus lobata HOM05D005342 ORTHO05D006925 1.2e-46 190.7 159 66.7
Manes.03G075200 Manihot esculenta HOM05D005342 ORTHO05D006925 1.6e-46 190.3 158 64.6
Potri.001G160800 Populus trichocarpa HOM05D005342 ORTHO05D006925 1.6e-46 190.3 176 61.4
TWI53G1312 Tripterygium wilfordii HOM05D005342 ORTHO05D006925 1.6e-46 190.3 176 59.1
Migut.M02010 Erythranthe guttata HOM05D005342 ORTHO05D006925 2.1e-46 189.9 158 65.2
Sabra01G0131500 Salix brachista HOM05D005342 ORTHO05D006925 2.1e-46 189.9 176 60.8
Gohir.A01G185820 Gossypium hirsutum HOM05D005342 ORTHO05D006925 2.7e-46 189.5 176 60.8
Gohir.D01G176400 Gossypium hirsutum HOM05D005342 ORTHO05D006925 2.7e-46 189.5 176 61.4
arahy.Tifrunner.gnm1.ann1.EGN9M7 Arachis hypogaea HOM05D005342 ORTHO05D006925 3.6e-46 189.1 176 59.1
GSVIVG01012146001 Vitis vinifera HOM05D005342 ORTHO05D006925 4.7e-46 188.7 176 60.8
Lalb_Chr10g0095551 Lupinus albus HOM05D005342 ORTHO05D006925 6.1e-46 188.3 178 59.0
CiPaw.09G137700 Carya illinoinensis HOM05D005342 ORTHO05D006925 1.4e-45 187.2 176 61.9
Glyma.07G173800 Glycine max HOM05D005342 ORTHO05D006925 1.4e-45 187.2 176 59.7
Lj2g0003117 Lotus japonicus HOM05D005342 ORTHO05D006925 1.4e-45 187.2 162 62.3
Carub.0001s2937 Capsella rubella HOM05D005342 ORTHO05D006925 1.8e-45 186.8 164 61.0
Phvul.003G015000 Phaseolus vulgaris HOM05D005342 ORTHO05D006925 1.8e-45 186.8 176 57.4
TAR626G0514 Trochodendron aralioides HOM05D005342 ORTHO05D006925 1.8e-45 186.8 159 60.4
Aa31LG9G16230 Aethionema arabicum HOM05D005342 ORTHO05D006925 2.3e-45 186.4 158 62.7
Nn2g13664 Nelumbo nucifera HOM05D005342 ORTHO05D006925 2.3e-45 186.4 160 61.2
MSTRG.16371 Avicennia marina HOM05D005342 ORTHO05D006925 3.0e-45 186.0 176 58.0
Lsat_1_v5_gn_6_95820 Lactuca sativa HOM05D005342 ORTHO05D006925 5.2e-45 185.3 186 55.9
Ca_26328_v3 Cicer arietinum L. HOM05D005342 ORTHO05D006925 8.8e-45 184.5 162 60.5
Haze_05265 Corylus avellana HOM05D005342 ORTHO05D006925 8.8e-45 184.5 175 59.4
MELO3C007034.2 Cucumis melo HOM05D005342 ORTHO05D006925 8.8e-45 184.5 176 58.0
CsaV3_6G052760 Cucumis sativus L. HOM05D005342 ORTHO05D006925 8.8e-45 184.5 176 58.0
Cpa.g.sc1627.2 Carica papaya HOM05D005342 ORTHO05D006925 1.2e-44 184.1 158 62.7
Ciclev10015344m.g Citrus clementina HOM05D005342 ORTHO05D006925 1.2e-44 184.1 176 58.0
Sed0018199 Sechium edule HOM05D005342 ORTHO05D006925 1.2e-44 184.1 176 58.0
Psat6g050320 Pisum sativum HOM05D005342 ORTHO05D006925 1.5e-44 183.7 162 59.9
Rhsim03G0048000 Rhododendron simsii HOM05D005342 ORTHO05D006925 1.5e-44 183.7 188 58.5
AL1G45370 Arabidopsis lyrata HOM05D005342 ORTHO05D006925 2.0e-44 183.3 164 60.4
CARHR030500 Cardamine hirsuta HOM05D005342 ORTHO05D006925 2.0e-44 183.3 164 60.4
DCAR_001275 Daucus carota HOM05D005342 ORTHO05D006925 2.6e-44 183.0 182 57.7
AT1G30960 Arabidopsis thaliana HOM05D005342 ORTHO05D006925 3.4e-44 182.6 164 59.8
Sp1g26820 Schrenkiella parvula HOM05D005342 ORTHO05D006925 4.4e-44 182.2 162 59.3
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 7.5e-44 181.4 188 57.4
BcaB07g32756 Brassica carinata HOM05D005342 ORTHO05D006925 9.8e-44 181.0 162 58.6
BolC5t31751H Brassica oleracea HOM05D005342 ORTHO05D006925 9.8e-44 181.0 162 58.6
AUR62020653 Chenopodium quinoa HOM05D005342 ORTHO05D006925 9.8e-44 181.0 158 63.3
Peaxi162Scf00520g00219 Petunia axillaris HOM05D005342 ORTHO05D006925 9.8e-44 181.0 162 61.1
SGA_v2.0_scaffold298G47707 Striga asiatica HOM05D005342 ORTHO05D006925 9.8e-44 181.0 176 59.1
A09p35250 Brassica napus HOM05D005342 ORTHO05D006925 1.3e-43 180.6 162 58.6
BraA09t39052Z Brassica rapa HOM05D005342 ORTHO05D006925 1.3e-43 180.6 162 58.6
Prupe.4G117500 Prunus persica HOM05D005342 ORTHO05D006925 1.3e-43 180.6 158 63.9
THA.LOC104814325 Tarenaya hassleriana HOM05D005342 ORTHO05D006925 1.3e-43 180.6 158 62.0
TPR.G34568 Trifolium pratense HOM05D005342 ORTHO05D006925 1.3e-43 180.6 162 59.3
A07p09560 Brassica napus HOM05D005342 ORTHO05D006925 1.7e-43 180.3 162 58.6
BraA07t28750Z Brassica rapa HOM05D005342 ORTHO05D006925 1.7e-43 180.3 162 58.6
SalBow8G1060 Salvia bowleyana HOM05D005342 ORTHO05D006925 1.7e-43 180.3 158 62.0
EL10Ac2g03680 Beta vulgaris HOM05D005342 ORTHO05D006925 2.8e-43 179.5 162 61.7
C07p14720 Brassica napus HOM05D005342 ORTHO05D006925 3.7e-43 179.1 162 58.0
BolC7t41974H Brassica oleracea HOM05D005342 ORTHO05D006925 3.7e-43 179.1 162 58.0
Thhalv10007654m.g Eutrema salsugineum HOM05D005342 ORTHO05D006925 3.7e-43 179.1 158 59.5
Eucgr.D00013 Eucalyptus grandis HOM05D005342 ORTHO05D006925 4.9e-43 178.7 176 58.0
BcaC05g27129 Brassica carinata HOM05D005342 ORTHO05D006925 6.3e-43 178.3 162 58.0
C05p30140 Brassica napus HOM05D005342 ORTHO05D006925 6.3e-43 178.3 162 58.0
unitig_749.g13576 Utricularia gibba HOM05D005342 ORTHO05D006925 6.3e-43 178.3 175 54.9
PGSC0003DMG400017735 Solanum tuberosum HOM05D005342 ORTHO05D006925 8.3e-43 177.9 162 58.6
Atru.chr10.349 Acer truncatum HOM05D005342 ORTHO05D006925 1.8e-42 176.8 176 57.4
AUR62038720 Chenopodium quinoa HOM05D005342 ORTHO05D006925 2.4e-42 176.4 158 62.0
Medtr5g020440 Medicago truncatula HOM05D005342 ORTHO05D006925 2.4e-42 176.4 162 58.6
HPP92_001898 Vanilla planifolia HOM05D005342 ORTHO05D006925 3.1e-42 176.0 123 70.7
Solyc02g081660.3 Solanum lycopersicum HOM05D005342 ORTHO05D006925 4.1e-42 175.6 162 58.6
Sopen02g026270 Solanum pennellii HOM05D005342 ORTHO05D006925 4.1e-42 175.6 162 58.6
MD05G1246900 Malus domestica HOM05D005342 ORTHO05D006925 5.4e-42 175.3 165 60.6
RcHm_v2.0_Chr5g0021061 Rosa chinensis HOM05D005342 ORTHO05D006925 5.4e-42 175.3 158 62.0
Atru.chr10.317 Acer truncatum HOM05D005342 ORTHO05D006925 7.0e-42 174.9 176 56.8
FvH4_3g12950 Fragaria vesca HOM05D005342 ORTHO05D006925 9.2e-42 174.5 176 57.4
PSO017G0115 Papaver somniferum HOM05D005342 ORTHO05D006925 9.2e-42 174.5 158 58.2
PSO063G2198 Papaver somniferum HOM05D005342 ORTHO05D006925 9.2e-42 174.5 158 58.2
Medtr6g024095 Medicago truncatula HOM05D005342 ORTHO05D006925 1.2e-41 174.1 162 58.0
PGR004G0306 Punica granatum HOM05D005342 ORTHO05D006925 1.2e-41 174.1 157 59.2
HPP92_001865 Vanilla planifolia HOM05D005342 ORTHO05D006925 1.2e-41 174.1 123 70.7
AUR62043831 Chenopodium quinoa HOM05D005342 ORTHO05D006925 2.0e-41 173.3 157 61.1
Os08g0207600 Oryza sativa ssp. japonica HOM05D005342 ORTHO05D006925 2.0e-41 173.3 176 54.0
Nitab4.5_0013176g0020 Nicotiana tabacum HOM05D005342 ORTHO05D006925 2.7e-41 172.9 185 55.1
SHI17083 Sapria himalayana HOM05D005342 ORTHO05D006925 4.5e-41 172.2 157 59.9
CAN.G809.68 Capsicum annuum HOM05D005342 ORTHO05D006925 5.9e-41 171.8 166 58.4
CDE06G1455 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 5.9e-41 171.8 105 78.1
ATR0763G223 Amborella trichopoda HOM05D005342 ORTHO05D006925 7.7e-41 171.4 177 52.5
CDE03G0515 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 7.7e-41 171.4 105 78.1
FAN11G0369 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.7e-40 170.2 187 55.1
MD10G1227500 Malus domestica HOM05D005342 ORTHO05D006925 1.7e-40 170.2 165 59.4
Medtr1g033240 Medicago truncatula HOM05D005342 ORTHO05D006925 3.8e-40 169.1 162 57.4
Zm00001eb171110 Zea mays HOM05D005342 ORTHO05D006925 3.8e-40 169.1 177 53.1
Aqoxy1G01397 Aquilegia oxysepala HOM05D005342 ORTHO05D006925 6.6e-40 168.3 105 79.0
FAN16G1572 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.5e-39 167.2 130 68.5
Cfa001127 Carpinus fangiana HOM05D005342 ORTHO05D006925 2.5e-39 166.4 148 63.5
FAN21G1494 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.6e-38 163.7 139 63.3
Actinidia37827 Actinidia chinensis HOM05D005342 ORTHO05D006925 2.1e-38 163.3 133 67.7
Ah.11g044120 Amaranthus hybridus HOM05D005342 ORTHO05D006925 1.4e-37 160.6 197 49.7
ClCG01G025520 Citrullus lanatus HOM05D005342 ORTHO05D006925 2.3e-37 159.8 176 55.1
FAN25G1408 Fragaria x ananassa HOM05D005342 ORTHO05D006925 5.2e-37 158.7 193 51.3
arahy.Tifrunner.gnm1.ann1.T4IDLE Arachis hypogaea HOM05D005342 ORTHO05D006925 1.4e-34 150.6 169 53.8
Rhsim03G0048600 Rhododendron simsii HOM05D005342 ORTHO05D006925 1.0e-32 144.4 134 59.7
Rhsim05G0150700 Rhododendron simsii HOM05D005342 ORTHO05D006925 3.0e-32 142.9 119 65.5
Cc09_g05190 Coffea canephora HOM05D005342 ORTHO05D006925 4.3e-31 139.0 85 80.0
vmacro07644 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 3.7e-27 125.9 172 46.5
Duzib132G0347 Durio zibethinus HOM05D005342 ORTHO05D006925 9.2e-26 121.3 173 45.1
AagrBONN_evm.TU.Sc2ySwM_368.2515 Anthoceros agrestis HOM05D005342 ORTHO05D006925 1.2e-22 110.9 116 47.4
Mapoly0029s0109 Marchantia polymorpha HOM05D005342 ORTHO05D006925 4.0e-21 105.9 162 38.9
Sc17g0004080 Simmondsia chinensis HOM05D005342 ORTHO05D006925 4.0e-21 105.9 108 55.6
Prupe.4G117700 Prunus persica HOM05D005342 ORTHO05D006925 6.8e-21 105.1 72 70.8
SGA_v2.0_scaffold175G39327 Striga asiatica HOM05D005342 ORTHO05D006925 8.9e-21 104.8 130 49.2
Pp3c8_14960 Physcomitrium patens HOM05D005342 ORTHO05D006925 3.4e-20 102.8 157 37.6
SMO347G0253 Selaginella moellendorffii HOM05D005342 ORTHO05D006925 9.8e-20 101.3 101 50.5
BcaB04g18195 Brassica carinata HOM05D005342 ORTHO05D006925 5.1e-16 89.0 55 72.7
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 1.2e-12 77.8 104 34.6
BraA08t33082Z Brassica rapa HOM05D005342 ORTHO05D006925 1.3e-11 74.3 59 62.7
BolC8t48183H Brassica oleracea HOM05D005342 ORTHO05D042222 7.8e-09 65.1 35 80.0
A08p10870 Brassica napus HOM05D005342 ORTHO05D042222 1.9e-07 60.5 34 73.5


User provided reference genes

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