Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009291 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D003343 6.4e-51 203.8 101 100.0
Actinidia38061 Actinidia chinensis HOM05D000009 ORTHO05D000008 5.9e-12 74.3 89 42.7
CSS0003798 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 6.5e-11 70.9 87 42.5
MELO3C023578.2 Cucumis melo HOM05D000009 ORTHO05D000008 5.5e-10 67.8 84 42.9
CsaV3_7G030800 Cucumis sativus L. HOM05D000009 ORTHO05D000008 7.2e-10 67.4 84 42.9
QL04p009421 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-09 65.5 82 42.7
Duzib248G0540 Durio zibethinus HOM05D000009 ORTHO05D000008 3.6e-09 65.1 87 40.2
QL04p009141 Quercus lobata HOM05D000009 ORTHO05D000008 4.7e-09 64.7 82 42.7
MD03G1279600 Malus domestica HOM05D000009 ORTHO05D000008 6.1e-09 64.3 83 41.0
QL04p009018 Quercus lobata HOM05D000009 ORTHO05D000008 6.1e-09 64.3 82 42.7
CsaV3_7G030780 Cucumis sativus L. HOM05D000009 ORTHO05D000008 8.0e-09 63.9 84 41.7
MD03G1279100 Malus domestica HOM05D000009 ORTHO05D000008 8.0e-09 63.9 83 41.0
QL04p008975 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-08 62.8 82 39.0
GSVIVG01008356001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.8e-08 62.8 84 39.3
MD03G1278800 Malus domestica HOM05D000009 ORTHO05D000008 2.3e-08 62.4 83 39.8
QL04p009376 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-08 62.0 82 39.0
GSVIVG01008357001 Vitis vinifera HOM05D000009 ORTHO05D000008 3.0e-08 62.0 84 39.3
Rhsim03G0043100 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.0e-08 61.6 97 40.2
TWI38G1426 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.0e-08 61.6 111 34.2
CsaV3_6G033980 Cucumis sativus L. HOM05D000009 ORTHO05D000008 5.2e-08 61.2 101 36.6
Manes.07G009500 Manihot esculenta HOM05D000009 ORTHO05D000008 6.7e-08 60.8 82 42.7
QL02p016325 Quercus lobata HOM05D000009 ORTHO05D000008 6.7e-08 60.8 84 39.3
RhsimUnG0220400 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.7e-08 60.8 99 39.4
RhsimUnG0238900 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.7e-08 60.8 99 39.4
MSTRG.3558 Avicennia marina HOM05D000009 ORTHO05D000008 8.8e-08 60.5 86 40.7
MELO3C027066.2 Cucumis melo HOM05D000009 ORTHO05D000008 8.8e-08 60.5 96 35.4
Dinv02313 Davidia involucrata HOM05D000009 ORTHO05D000008 8.8e-08 60.5 101 37.6
QL03p000889 Quercus lobata HOM05D000009 ORTHO05D000008 8.8e-08 60.5 84 40.5
QL93p0140_0018 Quercus lobata HOM05D000009 ORTHO05D000008 8.8e-08 60.5 84 40.5
PSO832G2185 Papaver somniferum HOM05D000009 ORTHO05D000008 1.1e-07 60.1 94 37.2
QL04p009063 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-07 60.1 82 40.2
MD03G1280200 Malus domestica HOM05D000009 ORTHO05D000008 1.5e-07 59.7 83 39.8
Hma1.2p1_1755F.1_g300990 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.0e-07 59.3 84 39.3
Nitab4.5_0000194g0230 Nicotiana tabacum HOM05D000009 ORTHO05D011077 2.0e-07 59.3 84 39.3
Rhsim03G0043200 Rhododendron simsii HOM05D000009 ORTHO05D003343 2.0e-07 59.3 88 39.8
Duzib212G0006 Durio zibethinus HOM05D000009 ORTHO05D000008 2.6e-07 58.9 84 39.3
Medtr3g015550 Medicago truncatula HOM05D000009 ORTHO05D000008 2.6e-07 58.9 85 36.5
Sed0021683 Sechium edule HOM05D000009 ORTHO05D000008 2.6e-07 58.9 83 41.0
CSS0035373 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 3.3e-07 58.5 84 40.5
CANSAT80G1278 Cannabis sativa HOM05D000009 ORTHO05D000008 3.3e-07 58.5 86 37.2
Hma1.2p1_2078F.1_g313380 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.3e-07 58.5 84 39.3
TWI09G0610 Tripterygium wilfordii HOM05D000009 ORTHO05D003343 3.3e-07 58.5 84 34.5
Dinv34383 Davidia involucrata HOM05D000009 ORTHO05D003343 4.4e-07 58.2 81 42.0
QL10p065497 Quercus lobata HOM05D000009 ORTHO05D000008 4.4e-07 58.2 86 40.7
Thecc.02G299800 Theobroma cacao HOM05D000009 ORTHO05D000008 4.4e-07 58.2 80 41.2
GSVIVG01008386001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.4e-07 58.2 84 40.5
GSVIVG01008392001 Vitis vinifera HOM05D000009 ORTHO05D003343 4.4e-07 58.2 84 40.5
Hma1.2p1_1168F.1_g263070 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.7e-07 57.8 101 35.6
Hma1.2p1_1250F.1_g270300 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.7e-07 57.8 94 38.3
Peaxi162Scf00019g00013 Petunia axillaris HOM05D000009 ORTHO05D000008 5.7e-07 57.8 84 38.1
QL09p028851 Quercus lobata HOM05D000009 ORTHO05D000008 5.7e-07 57.8 88 39.8
Duzib151G0124 Durio zibethinus HOM05D000009 ORTHO05D000008 7.5e-07 57.4 92 38.0
Hma1.2p1_0924F.1_g237270 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.5e-07 57.4 84 38.1
Manes.07G043800 Manihot esculenta HOM05D000009 ORTHO05D000008 7.5e-07 57.4 86 40.7
Manes.09G025400 Manihot esculenta HOM05D000009 ORTHO05D000008 7.5e-07 57.4 89 36.0
Manes.09G025800 Manihot esculenta HOM05D000009 ORTHO05D000008 7.5e-07 57.4 86 38.4
Nitab4.5_0000867g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.5e-07 57.4 86 37.2
QL04p007111 Quercus lobata HOM05D000009 ORTHO05D000008 7.5e-07 57.4 86 40.7
QL10p056853 Quercus lobata HOM05D000009 ORTHO05D000008 7.5e-07 57.4 85 38.8
QL93p2025_0032 Quercus lobata HOM05D000009 ORTHO05D000008 7.5e-07 57.4 86 40.7
Sabra06G0213500 Salix brachista HOM05D000009 ORTHO05D000008 7.5e-07 57.4 91 31.9
TWI38G1899 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.5e-07 57.4 111 28.8
Duzib212G0367 Durio zibethinus HOM05D000009 ORTHO05D000008 9.7e-07 57.0 87 35.6
Nitab4.5_0009269g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.7e-07 57.0 86 37.2
PSO063G7656 Papaver somniferum HOM05D000009 ORTHO05D000008 9.7e-07 57.0 82 35.4
QL04p005691 Quercus lobata HOM05D000009 ORTHO05D000008 9.7e-07 57.0 83 41.0
PGSC0003DMG400006785 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.7e-07 57.0 88 38.6
CANSAT80G0720 Cannabis sativa HOM05D000009 ORTHO05D000008 1.3e-06 56.6 84 39.3
CANSAT80G2491 Cannabis sativa HOM05D000009 ORTHO05D000008 1.3e-06 56.6 86 37.2
Hma1.2p1_1755F.1_g300950 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.3e-06 56.6 84 38.1
Manes.07G009201 Manihot esculenta HOM05D000009 ORTHO05D000008 1.3e-06 56.6 82 40.2
Manes.07G043891 Manihot esculenta HOM05D000009 ORTHO05D000008 1.3e-06 56.6 82 41.5
Manes.07G045400 Manihot esculenta HOM05D000009 ORTHO05D000008 1.3e-06 56.6 82 42.7
Potri.017G140132 Populus trichocarpa HOM05D000009 ORTHO05D000008 1.3e-06 56.6 84 36.9
GSVIVG01000884001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.3e-06 56.6 86 37.2
GSVIVG01033292001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.3e-06 56.6 84 35.7
CANSAT80G0477 Cannabis sativa HOM05D000009 ORTHO05D000008 1.7e-06 56.2 84 36.9
CANSAT80G1210 Cannabis sativa HOM05D000009 ORTHO05D000008 1.7e-06 56.2 84 36.9
CsaV3_7G030760 Cucumis sativus L. HOM05D000009 ORTHO05D000008 1.7e-06 56.2 80 40.0
Duzib212G0493 Durio zibethinus HOM05D000009 ORTHO05D000008 1.7e-06 56.2 87 34.5
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.7e-06 56.2 84 36.9
Manes.07G008700 Manihot esculenta HOM05D000009 ORTHO05D000008 1.7e-06 56.2 82 41.5
Manes.09G025732 Manihot esculenta HOM05D000009 ORTHO05D000008 1.7e-06 56.2 86 37.2
PSO423G0063 Papaver somniferum HOM05D000009 ORTHO05D000008 1.7e-06 56.2 82 36.6
Potri.017G137700 Populus trichocarpa HOM05D000009 ORTHO05D000008 1.7e-06 56.2 81 39.5
TWI38G0183 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-06 56.2 86 36.0
TWI38G1544 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-06 56.2 86 36.0
TWI38G1842 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-06 56.2 86 36.0
GSVIVG01000882001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.7e-06 56.2 85 36.5
MELO3C015354.2 Cucumis melo HOM05D000009 ORTHO05D000008 2.2e-06 55.8 102 36.3
MELO3C023567.2 Cucumis melo HOM05D000009 ORTHO05D003343 2.2e-06 55.8 102 36.3
CsaV3_1G039300 Cucumis sativus L. HOM05D000009 ORTHO05D000008 2.2e-06 55.8 87 36.8
Dinv44707 Davidia involucrata HOM05D000009 ORTHO05D003343 2.2e-06 55.8 85 41.2
MD07G1015700 Malus domestica HOM05D000009 ORTHO05D000008 2.2e-06 55.8 78 38.5
Manes.07G008990 Manihot esculenta HOM05D000009 ORTHO05D000008 2.2e-06 55.8 82 41.5
Manes.07G009920 Manihot esculenta HOM05D000009 ORTHO05D000008 2.2e-06 55.8 82 41.5
Manes.09G024786 Manihot esculenta HOM05D000009 ORTHO05D003343 2.2e-06 55.8 86 37.2
Manes.09G025646 Manihot esculenta HOM05D000009 ORTHO05D000008 2.2e-06 55.8 86 37.2
Manes.09G026000 Manihot esculenta HOM05D000009 ORTHO05D000008 2.2e-06 55.8 86 37.2
Rhsim03G0042800 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.2e-06 55.8 97 38.1
TWI53G2039 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.2e-06 55.8 97 34.0
CANSAT80G0080 Cannabis sativa HOM05D000009 ORTHO05D003343 2.8e-06 55.5 86 36.0
Gohir.A03G114300 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.8e-06 55.5 79 36.7
Gohir.D02G138200 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.8e-06 55.5 79 36.7
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.8e-06 55.5 76 40.8
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 2.8e-06 55.5 81 39.5
Manes.07G008900 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-06 55.5 82 41.5
Manes.07G009801 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-06 55.5 82 41.5
Manes.07G044166 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-06 55.5 82 41.5
Manes.07G044350 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-06 55.5 82 41.5
Manes.07G044900 Manihot esculenta HOM05D000083 ORTHO05D002058 2.8e-06 55.5 82 41.5
Manes.09G025388 Manihot esculenta HOM05D000009 ORTHO05D000008 2.8e-06 55.5 86 37.2
QL04p001957 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-06 55.5 86 37.2
QL04p005812 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-06 55.5 86 39.5
QL07p043548 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-06 55.5 85 36.5
Thecc.04G163600 Theobroma cacao HOM05D000009 ORTHO05D000008 2.8e-06 55.5 83 38.6
CiPaw.13G155700 Carya illinoinensis HOM05D000009 ORTHO05D000008 3.7e-06 55.1 86 37.2
Manes.09G024872 Manihot esculenta HOM05D000009 ORTHO05D000008 3.7e-06 55.1 86 36.0
Medtr3g015560 Medicago truncatula HOM05D000009 ORTHO05D000008 3.7e-06 55.1 87 36.8
PSO339G5688 Papaver somniferum HOM05D000009 ORTHO05D000008 3.7e-06 55.1 98 32.7
Potri.006G272066 Populus trichocarpa HOM05D000009 ORTHO05D000008 3.7e-06 55.1 89 32.6
Prupe.2G014100 Prunus persica HOM05D000009 ORTHO05D000008 3.7e-06 55.1 80 38.8
MELO3C000321.2 Cucumis melo HOM05D000009 ORTHO05D000008 4.8e-06 54.7 97 37.1
Manes.07G009080 Manihot esculenta HOM05D000009 ORTHO05D000008 4.8e-06 54.7 82 40.2
Manes.09G024959 Manihot esculenta HOM05D000009 ORTHO05D003343 4.8e-06 54.7 84 38.1
Manes.09G025302 Manihot esculenta HOM05D000009 ORTHO05D000008 4.8e-06 54.7 86 36.0
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 4.8e-06 54.7 76 40.8
QL11p042820 Quercus lobata HOM05D000009 ORTHO05D000008 4.8e-06 54.7 99 32.3
Rhsim03G0042400 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.8e-06 54.7 98 38.8
Rhsim05G0052600 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.8e-06 54.7 84 36.9
RhsimUnG0090600 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.8e-06 54.7 86 39.5
CiPaw.13G156000 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.3e-06 54.3 86 36.0
CiPaw.13G156500 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.3e-06 54.3 86 36.0
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 6.3e-06 54.3 84 36.9
Eucgr.G01790 Eucalyptus grandis HOM05D000009 ORTHO05D000008 6.3e-06 54.3 85 34.1
Eucgr.K01752 Eucalyptus grandis HOM05D000009 ORTHO05D000008 6.3e-06 54.3 80 41.2
Lj5C507T2 Lonicera japonica HOM05D000009 ORTHO05D000008 6.3e-06 54.3 80 41.2
Lj5C508G8 Lonicera japonica HOM05D000009 ORTHO05D000008 6.3e-06 54.3 81 37.0
Medtr4g050790 Medicago truncatula HOM05D000009 ORTHO05D000008 6.3e-06 54.3 85 35.3
Potri.018G017900 Populus trichocarpa HOM05D000009 ORTHO05D000008 6.3e-06 54.3 88 35.2
QL10p056812 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-06 54.3 85 36.5
QL11p011741 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-06 54.3 81 38.3
RhsimUnG0022400 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.3e-06 54.3 86 39.5
TWI09G0517 Tripterygium wilfordii HOM05D000009 ORTHO05D003343 6.3e-06 54.3 80 32.5
TWI38G2259 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.3e-06 54.3 83 33.7
CiPaw.13G156300 Carya illinoinensis HOM05D000009 ORTHO05D000008 8.2e-06 53.9 86 36.0
Dinv12469 Davidia involucrata HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 38.1
Duzib212G0401 Durio zibethinus HOM05D000009 ORTHO05D000008 8.2e-06 53.9 82 36.6
Duzib212G0649 Durio zibethinus HOM05D000009 ORTHO05D000008 8.2e-06 53.9 87 35.6
Gohir.A03G013782 Gossypium hirsutum HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 36.9
Hma1.2p1_1168F.1_g263060 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 36.9
Lj5A663T29 Lonicera japonica HOM05D000009 ORTHO05D003343 8.2e-06 53.9 81 35.8
Manes.09G025044 Manihot esculenta HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 36.9
Manes.09G025861 Manihot esculenta HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 36.9
PSO421G0040 Papaver somniferum HOM05D000009 ORTHO05D000008 8.2e-06 53.9 81 39.5
QL07p043376 Quercus lobata HOM05D000009 ORTHO05D000008 8.2e-06 53.9 85 35.3
QL11p004221 Quercus lobata HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 36.9
QL11p013448 Quercus lobata HOM05D000009 ORTHO05D000008 8.2e-06 53.9 84 35.7
TAR633G1554 Trochodendron aralioides HOM05D000009 ORTHO05D003343 8.2e-06 53.9 81 39.5


User provided reference genes

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