Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 3.3e-161 571.6 280 100.0
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.2e-160 569.7 280 99.6
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 2.1e-128 462.6 280 83.2
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 1.1e-119 433.7 279 76.3
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 1.3e-117 426.8 374 61.8
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 4.6e-115 418.3 234 84.2
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 4.9e-109 398.3 279 71.7
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 1.4e-108 396.7 278 69.8
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 1.9e-108 396.4 279 71.0
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 3.2e-108 395.6 279 66.3
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 7.1e-108 394.4 277 69.7
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 1.6e-107 393.3 278 70.1
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 3.5e-107 392.1 278 69.8
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 7.9e-107 391.0 278 69.8
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 1.3e-106 390.2 277 69.3
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.3e-106 390.2 277 68.6
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 1.3e-106 390.2 279 69.2
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 1.8e-106 389.8 279 67.0
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 2.3e-106 389.4 281 70.1
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 1.9e-105 386.3 281 69.8
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 4.3e-105 385.2 280 68.6
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 4.3e-105 385.2 279 67.7
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 9.6e-105 384.0 279 71.3
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 1.6e-104 383.3 278 68.0
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 4.8e-104 381.7 277 65.0
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.1e-103 380.6 280 67.5
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 1.4e-103 380.2 281 68.0
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 2.4e-103 379.4 279 67.7
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.4e-103 379.4 278 66.9
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 3.1e-103 379.0 288 67.4
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 9.0e-103 377.5 279 66.7
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.2e-102 377.1 278 66.5
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 1.5e-102 376.7 286 67.5
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.0e-102 376.3 278 66.5
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 3.4e-102 375.6 279 65.9
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 1.0e-101 374.0 281 65.1
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 1.1e-100 370.5 280 66.8
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 4.2e-100 368.6 281 63.7
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 5.5e-100 368.2 281 66.5
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 1.0e-98 364.0 499 45.7
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 3.0e-98 362.5 279 64.2
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 3.9e-98 362.1 282 65.6
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 2.2e-96 356.3 275 65.1
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 4.1e-95 352.1 278 62.2
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 5.3e-95 351.7 280 60.0
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 3.4e-94 349.0 278 60.4
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 4.5e-94 348.6 277 60.3
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 1.3e-93 347.1 277 61.7
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.3e-93 347.1 284 60.2
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 2.2e-93 346.3 277 60.6
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 2.2e-93 346.3 277 60.6
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 2.9e-93 345.9 277 60.6
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 5.0e-93 345.1 277 61.0
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 6.5e-93 344.7 279 61.3
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 8.5e-93 344.4 276 61.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 8.5e-93 344.4 274 60.6
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.1e-92 344.0 274 60.2
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.4e-92 343.6 276 59.1
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 3.2e-92 342.4 281 58.7
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 4.2e-92 342.0 279 60.6
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 5.5e-92 341.7 278 65.8
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 7.2e-92 341.3 274 60.2
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 7.2e-92 341.3 282 60.3
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.1e-91 339.7 277 60.3
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 2.1e-91 339.7 281 60.1
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 4.6e-91 338.6 277 58.8
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 4.6e-91 338.6 271 63.5
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 1.8e-90 336.7 277 59.9
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 3.0e-90 335.9 279 58.8
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 6.7e-90 334.7 277 59.2
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 6.7e-90 334.7 277 59.2
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 4.3e-89 332.0 277 59.9
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 7.4e-89 331.3 279 58.8
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 1.3e-88 330.5 305 54.4
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 1.4e-87 327.0 270 63.7
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 1.8e-87 326.6 309 52.1
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 3.4e-86 322.4 273 58.6
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 7.7e-86 321.2 251 65.3
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 6.1e-83 311.6 353 47.3
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 1.5e-81 307.0 267 56.2
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.5e-81 307.0 204 67.2
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 7.4e-81 304.7 277 55.2
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 1.8e-79 300.1 243 58.0
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 4.2e-76 288.9 209 65.6
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 4.7e-75 285.4 331 52.3
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 5.7e-73 278.5 253 57.3
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 2.2e-72 276.6 156 82.7
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 1.4e-71 273.9 280 49.6
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 3.1e-71 272.7 279 51.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.4e-63 246.5 217 62.7
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 8.0e-59 231.5 188 64.4
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 4.9e-56 222.2 222 55.9
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 1.9e-52 210.3 213 45.1
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 7.2e-52 208.4 190 57.4
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 9.5e-52 208.0 272 39.0
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 2.0e-49 200.3 232 44.4
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 1.3e-48 197.6 234 40.2
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 1.4e-42 177.6 114 66.7
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 1.2e-38 164.5 102 71.6
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 3.5e-38 162.9 197 45.7
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 6.2e-35 152.1 216 43.1
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 1.7e-29 134.0 70 80.0
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 4.3e-28 129.4 141 53.2
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 2.8e-27 126.7 178 43.8
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 8.9e-26 121.7 97 59.8
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 6.4e-24 115.5 78 67.9
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 1.5e-17 94.4 68 55.9
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 4.2e-15 86.3 197 30.5
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 5.1e-13 79.3 52 59.6
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 4.8e-11 72.8 238 23.9
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 4.9e-08 62.8 280 23.9


User provided reference genes

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