Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-110 403.3 201 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-104 383.3 211 92.4
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-101 372.9 211 90.5
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-100 368.6 211 89.6
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-96 356.3 213 88.3
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-92 342.8 212 86.3
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.3e-90 334.3 212 84.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-89 332.4 194 89.2
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 9.4e-86 320.5 211 75.4
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 9.4e-86 320.5 211 75.4
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-77 293.1 211 75.8
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.3e-76 289.3 203 70.4
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 5.0e-71 271.6 207 66.7
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 9.4e-70 267.3 212 60.8
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 6.1e-69 264.6 203 66.5
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 5.2e-68 261.5 204 65.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 6.8e-68 261.2 211 61.6
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.6e-67 259.2 205 65.4
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 4.4e-67 258.5 211 63.0
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 5.7e-67 258.1 206 65.0
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 2.2e-66 256.1 211 60.7
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 4.8e-66 255.0 211 64.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.1e-65 253.8 221 62.4
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.4e-65 252.7 211 59.7
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 3.1e-65 252.3 211 63.0
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 7.0e-65 251.1 212 60.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.2e-64 250.4 214 61.7
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 3.5e-64 248.8 201 64.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.0e-63 247.3 205 61.5
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.0e-63 247.3 211 58.8
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.3e-63 246.9 215 63.7
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 8.6e-63 244.2 211 63.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 8.6e-63 244.2 205 63.9
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 8.6e-63 244.2 205 61.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.9e-62 243.0 211 60.2
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 4.2e-62 241.9 216 60.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 5.5e-62 241.5 203 61.1
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 5.5e-62 241.5 217 57.6
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 9.5e-62 240.7 205 62.9
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 2.1e-61 239.6 200 62.0
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.0e-60 237.3 212 61.3
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.0e-60 237.3 200 62.5
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 3.0e-60 235.7 211 59.7
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.2e-60 235.0 217 55.8
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.2e-60 235.0 205 58.5
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 6.8e-60 234.6 216 56.0
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.8e-60 234.6 205 59.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 8.9e-60 234.2 210 59.0
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.5e-59 233.4 200 61.0
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.0e-59 233.0 216 59.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 9.8e-59 230.7 205 58.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 9.8e-59 230.7 214 55.1
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 2.8e-58 229.2 216 58.3
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 6.3e-58 228.0 217 54.8
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 6.3e-58 228.0 217 54.8
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 8.3e-58 227.6 217 58.5
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.1e-57 225.3 215 61.9
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.6e-56 223.4 206 61.2
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.0e-56 223.0 205 57.1
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 5.9e-56 221.5 200 55.5
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.0e-55 220.7 202 58.4
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 7.3e-54 214.5 211 55.0
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.6e-53 213.4 217 51.6
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.6e-53 213.4 217 51.6
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.1e-53 213.0 217 50.7
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 2.8e-53 212.6 205 56.1
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.8e-53 212.6 211 55.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.8e-52 209.9 208 58.7
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.3e-52 209.5 211 54.5
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 4.0e-52 208.8 218 54.6
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 3.4e-51 205.7 205 57.6
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.8e-51 204.9 214 53.3
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 3.7e-50 202.2 208 50.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.4e-49 200.3 216 51.9
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.7e-48 196.1 208 51.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.6e-48 195.3 210 50.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 8.6e-47 191.0 218 48.2
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.1e-46 190.7 212 53.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.5e-46 190.3 221 49.3
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.3e-46 188.7 207 51.2
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.2e-45 187.2 212 49.5
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 2.1e-45 186.4 208 47.6
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 2.1e-45 186.4 216 50.0
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.8e-45 186.0 214 50.0
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.3e-44 183.0 207 47.8
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 5.2e-44 181.8 213 46.9
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.2e-43 180.6 210 50.5
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.2e-43 180.6 210 50.5
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 1.5e-43 180.3 208 49.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.5e-43 180.3 212 53.8
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 5.8e-43 178.3 210 49.5
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 5.8e-43 178.3 210 49.5
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.7e-42 176.8 210 49.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.2e-42 176.4 216 47.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 2.2e-42 176.4 211 48.8
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 4.9e-42 175.3 216 47.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 4.9e-42 175.3 216 46.8
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 4.9e-42 175.3 222 46.8
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.1e-41 174.1 216 48.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.4e-41 172.9 222 45.5
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.6e-40 170.2 209 49.8
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.0e-39 167.5 215 46.5
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.6e-37 160.2 172 54.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 2.3e-31 139.8 208 38.9
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 5.8e-27 125.2 103 61.2
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.1e-25 120.9 88 69.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.2e-24 117.5 216 35.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.1e-23 112.1 208 34.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 5.3e-20 102.1 200 36.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.2e-19 100.9 209 35.9
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 7.6e-19 98.2 170 38.2
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 4.9e-10 68.9 56 57.1


User provided reference genes

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