Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.0e-41 170.2 90 100.0
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.6e-38 160.6 90 92.2
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.0e-35 152.1 90 88.9
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.8e-32 140.2 88 86.4
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.9e-31 137.9 85 85.9
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.1e-31 137.5 74 97.3
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.3e-30 133.7 74 94.6
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.6e-27 125.2 69 94.2
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.2e-26 122.1 74 86.5
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.7e-26 121.3 74 85.1
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.9e-26 120.9 73 86.3
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.2e-21 104.0 58 91.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 5.4e-17 90.9 74 59.5
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.2e-13 79.7 75 61.3
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 6.9e-12 73.9 77 57.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 2.2e-10 68.9 75 54.7
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.1e-09 66.6 77 48.1
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 2.4e-09 65.5 75 49.3
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-09 65.5 75 50.7
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 4.2e-09 64.7 57 56.1
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 1.2e-08 63.2 76 51.3
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-08 62.8 74 48.6
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 2.1e-08 62.4 59 50.8
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 4.6e-08 61.2 75 48.0
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 6.0e-08 60.8 57 54.4
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 6.0e-08 60.8 57 56.1
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 7.8e-08 60.5 78 51.3
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.0e-07 60.1 76 50.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.7e-07 59.3 57 54.4
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 6.6e-07 57.4 83 42.2
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 8.7e-07 57.0 78 44.9
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 8.7e-07 57.0 78 47.4
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.1e-06 56.6 44 59.1
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 1.1e-06 56.6 80 42.5
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-06 56.6 44 59.1
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 2.5e-06 55.5 60 48.3
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 3.3e-06 55.1 85 38.8
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 4.3e-06 54.7 73 41.1
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 7.3e-06 53.9 44 56.8
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 9.6e-06 53.5 77 40.3


User provided reference genes

Program Settings