Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.9e-199 698.4 348 100.0
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 8.0e-109 397.9 414 57.7
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 1.5e-86 323.9 419 49.2
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.5e-86 323.9 434 48.6
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 7.3e-78 295.0 415 46.7
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 6.2e-77 292.0 432 44.4
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 3.1e-76 289.7 398 48.2
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 8.9e-76 288.1 403 45.7
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 3.4e-75 286.2 335 50.7
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 5.4e-73 278.9 416 43.3
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 7.8e-72 275.0 419 42.2
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 1.7e-71 273.9 420 43.6
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 2.3e-71 273.5 418 43.1
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 8.7e-71 271.6 432 42.6
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 1.1e-70 271.2 419 43.4
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 1.5e-70 270.8 419 44.2
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 1.9e-70 270.4 419 43.2
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 2.5e-70 270.0 418 43.3
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 3.3e-70 269.6 416 41.8
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 5.6e-70 268.9 419 42.0
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 5.6e-70 268.9 367 46.3
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.3e-69 267.7 421 42.5
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.3e-69 267.7 411 42.6
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 1.6e-69 267.3 418 42.8
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 1.6e-69 267.3 428 42.5
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 1.6e-69 267.3 424 40.8
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 3.6e-69 266.2 424 43.9
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 3.6e-69 266.2 416 42.5
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 3.6e-69 266.2 404 42.6
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 6.2e-69 265.4 424 43.2
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 8.1e-69 265.0 418 42.3
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.1e-68 264.6 429 41.3
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.1e-68 264.6 365 46.6
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 4.0e-68 262.7 429 41.0
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 4.0e-68 262.7 431 42.0
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.5e-67 260.8 418 42.1
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 2.0e-67 260.4 407 41.5
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.0e-67 260.4 411 43.3
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 4.4e-67 259.2 376 43.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 4.4e-67 259.2 387 44.4
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 4.4e-67 259.2 428 41.1
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 5.8e-67 258.8 420 40.2
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 7.6e-67 258.5 418 40.9
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 7.6e-67 258.5 404 41.6
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 7.6e-67 258.5 415 41.0
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 9.9e-67 258.1 373 45.6
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 1.7e-66 257.3 421 40.4
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 4.9e-66 255.8 414 41.5
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 8.4e-66 255.0 412 41.5
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 8.4e-66 255.0 436 40.1
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 1.4e-65 254.2 407 41.8
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.9e-65 253.8 391 42.5
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 5.4e-65 252.3 438 40.4
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 7.1e-65 251.9 237 58.6
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 7.1e-65 251.9 414 40.8
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 1.2e-64 251.1 414 40.6
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 1.6e-64 250.8 405 41.5
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.6e-64 250.8 308 47.1
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.9e-64 248.4 415 40.0
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.9e-64 248.4 415 40.0
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 5.1e-63 245.7 412 41.7
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 8.7e-63 245.0 417 40.3
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.1e-62 244.6 415 39.8
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 9.6e-62 241.5 378 41.8
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 2.8e-61 240.0 417 40.8
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 2.8e-61 240.0 401 41.1
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.1e-60 238.0 414 38.4
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.4e-60 237.7 421 39.0
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 3.1e-60 236.5 426 36.9
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 4.0e-60 236.1 421 38.2
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 6.9e-60 235.3 418 37.8
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 6.9e-60 235.3 425 37.6
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 9.0e-60 235.0 292 48.3
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 1.2e-59 234.6 429 37.5
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 1.2e-59 234.6 429 37.5
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 3.4e-59 233.0 427 37.0
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 4.5e-59 232.6 418 38.3
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 4.5e-59 232.6 430 37.2
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 5.8e-59 232.3 429 37.1
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 7.6e-59 231.9 426 36.9
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 3.8e-58 229.6 418 37.8
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.4e-57 227.6 328 43.0
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.9e-57 227.3 373 42.4
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 3.2e-57 226.5 432 36.6
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 4.2e-57 226.1 405 38.5
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 8.7e-55 218.4 303 43.2
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 1.5e-54 217.6 442 35.7
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 3.3e-54 216.5 422 36.5
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 4.3e-54 216.1 400 37.8
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 4.3e-54 216.1 278 45.7
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 4.3e-54 216.1 236 53.4
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.3e-53 214.5 345 40.3
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.1e-52 211.5 279 44.8
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 1.8e-52 210.7 421 35.9
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 3.1e-52 209.9 366 38.8
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 7.6e-51 205.3 288 45.1
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 8.4e-50 201.8 249 51.4
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 2.5e-49 200.3 360 39.2
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.3e-47 193.7 258 46.5
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 4.3e-46 189.5 238 46.2
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 4.3e-46 189.5 320 40.6
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 7.4e-46 188.7 382 35.9
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 8.2e-45 185.3 415 34.5
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 5.9e-43 179.1 355 37.5
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.8e-39 167.5 360 35.3
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 5.1e-39 166.0 314 36.6
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 9.0e-36 155.2 257 38.9
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 4.5e-35 152.9 339 37.8
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 7.9e-32 142.1 159 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 2.2e-29 134.0 320 30.9
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 4.1e-28 129.8 426 28.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 6.9e-28 129.0 255 35.3
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 9.1e-28 128.6 422 28.4
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.5e-27 126.3 432 27.1
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 3.8e-26 123.2 443 28.4
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 5.0e-26 122.9 91 65.9
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.8e-23 112.1 116 55.2
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.3e-22 110.2 116 52.6
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 4.4e-22 109.8 127 51.2
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 4.2e-09 66.6 41 78.0
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 8.0e-08 62.4 226 24.8
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.7e-06 56.2 36 69.4


User provided reference genes

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