Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 0.0e+00 1242.3 851 100.0
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 6.0e-267 924.5 798 79.1
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 3.3e-233 812.4 804 70.8
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.8e-215 753.4 800 66.6
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 9.8e-209 731.1 798 66.3
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 2.2e-208 729.9 799 65.0
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 9.1e-207 724.5 783 69.5
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 1.6e-198 697.2 796 63.1
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 2.0e-198 696.8 791 63.7
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 3.5e-198 696.0 785 68.4
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 1.9e-196 690.3 805 68.1
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 5.2e-194 682.2 805 62.6
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.2e-193 681.0 801 65.4
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 2.9e-192 676.4 798 61.9
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 4.6e-190 669.1 797 61.5
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.0e-187 658.3 797 58.8
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 6.8e-186 655.2 798 64.4
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 3.7e-184 649.4 798 64.0
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 5.1e-181 639.0 798 59.0
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 5.6e-180 635.6 793 63.6
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 7.3e-180 635.2 805 59.5
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 2.1e-179 633.6 805 60.4
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 6.2e-179 632.1 802 59.5
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.8e-178 630.6 802 59.1
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.2e-177 627.9 800 58.6
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.0e-177 627.1 800 58.8
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 2.6e-177 626.7 814 60.8
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 7.5e-177 625.2 795 60.3
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 7.5e-177 625.2 798 62.7
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 3.7e-176 622.9 800 58.5
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 3.2e-175 619.8 803 59.8
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 9.2e-175 618.2 759 64.6
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.6e-174 617.5 823 59.4
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 6.0e-174 615.5 792 59.6
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.9e-172 610.5 690 65.1
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 1.2e-171 607.8 780 52.4
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 3.6e-171 606.3 798 58.0
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 6.2e-171 605.5 744 59.9
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 1.8e-170 604.0 803 57.9
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 1.7e-168 597.4 804 58.0
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 4.9e-168 595.9 798 56.5
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 3.2e-167 593.2 791 58.0
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 3.5e-166 589.7 717 62.2
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 1.7e-165 587.4 799 57.8
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 1.9e-164 583.9 811 56.6
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 8.1e-163 578.6 780 56.8
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.1e-162 578.2 788 51.5
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 3.4e-161 573.2 813 50.4
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 2.9e-160 570.1 798 55.8
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 6.4e-160 568.9 784 51.3
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 8.4e-160 568.5 793 56.0
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 8.4e-160 568.5 793 56.0
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 1.1e-159 568.2 791 55.9
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.1e-159 568.2 778 56.9
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 1.9e-159 567.4 798 55.4
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 3.2e-159 566.6 784 55.4
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 3.2e-159 566.6 784 55.4
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.1e-158 563.9 800 55.6
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 2.7e-158 563.5 778 56.2
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 1.7e-157 560.8 786 56.4
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 3.0e-157 560.1 775 56.4
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 3.0e-157 560.1 797 55.6
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 5.1e-157 559.3 766 58.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 7.3e-156 555.4 813 51.3
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.1e-154 551.6 780 48.6
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.4e-154 551.2 754 56.9
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.8e-154 550.8 780 48.5
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 3.1e-154 550.1 799 55.9
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 6.9e-154 548.9 808 49.1
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 3.4e-153 546.6 813 46.5
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 7.6e-153 545.4 766 59.3
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 2.4e-151 540.4 759 56.5
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 3.2e-151 540.0 813 48.1
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 4.2e-151 539.7 800 54.9
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 1.2e-150 538.1 735 56.5
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 6.0e-150 535.8 790 55.3
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 3.9e-149 533.1 806 52.5
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 5.1e-149 532.7 739 56.2
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 8.7e-149 531.9 783 55.0
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 6.9e-146 522.3 811 55.2
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 3.4e-145 520.0 801 55.1
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 8.4e-144 515.4 801 54.3
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 5.5e-143 512.7 740 56.9
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.5e-132 478.0 787 43.1
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 4.8e-115 419.9 730 50.5
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 9.1e-114 415.6 548 65.0
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 5.2e-109 399.8 777 41.6
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.5e-108 398.3 816 44.5
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 4.4e-108 396.7 526 64.4
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 1.0e-96 359.0 494 59.5
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 8.0e-86 322.8 407 66.3
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 7.5e-84 316.2 531 57.3
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 1.8e-82 311.6 393 59.3
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 4.9e-75 287.0 796 41.6
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 5.4e-74 283.5 757 45.3
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 2.4e-66 258.1 658 30.4
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 1.1e-61 242.7 206 59.7
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.2e-58 231.1 792 38.1
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 1.4e-50 205.7 226 53.5
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 2.7e-49 201.4 229 52.4
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 1.7e-43 182.2 314 51.3
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 3.1e-37 161.4 509 32.6
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 4.5e-36 157.5 164 51.8
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 4.0e-29 134.4 134 56.7
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 5.7e-23 114.0 197 39.1
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 6.3e-22 110.5 109 75.2
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 1.1e-18 99.8 74 63.5
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 7.2e-10 70.5 160 55.6


User provided reference genes

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