Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008158 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.0e-33 144.4 66 100.0
CSS0009145 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.0e-33 144.4 66 100.0
CSS0012661 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 6.7e-33 143.3 65 98.5
CSS0002479 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 7.5e-32 139.8 65 98.5
CSS0029893 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.5e-29 131.0 65 92.3
CSS0026552 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111796 4.7e-18 94.0 81 59.3
CSS0021916 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.0e-17 92.8 66 69.7
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 1.5e-16 89.0 67 67.2
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 2.0e-16 88.6 67 68.7
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 2.6e-16 88.2 67 65.7
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 2.6e-16 88.2 67 65.7
Dinv06874 Davidia involucrata HOM05D000251 ORTHO05D005532 3.4e-16 87.8 67 65.7
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 5.7e-16 87.0 44 88.6
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 5.7e-16 87.0 44 88.6
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 5.7e-16 87.0 44 88.6
Dinv04805 Davidia involucrata HOM05D000251 ORTHO05D005532 5.7e-16 87.0 44 88.6
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 5.7e-16 87.0 44 88.6
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 7.5e-16 86.7 44 88.6
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 7.5e-16 86.7 67 65.7
Peaxi162Scf00495g00121 Petunia axillaris HOM05D000251 ORTHO05D005532 7.5e-16 86.7 44 86.4
Psat6g048960 Pisum sativum HOM05D000251 ORTHO05D005532 7.5e-16 86.7 44 86.4
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 9.8e-16 86.3 67 67.2
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 9.8e-16 86.3 67 67.2
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 9.8e-16 86.3 67 65.7
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 9.8e-16 86.3 67 64.2
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 1.3e-15 85.9 44 86.4
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 1.3e-15 85.9 67 67.2
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 1.3e-15 85.9 67 64.2
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 1.7e-15 85.5 67 65.7
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
Solyc11g017170.1 Solanum lycopersicum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 1.7e-15 85.5 44 86.4
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 2.2e-15 85.1 44 86.4
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 2.2e-15 85.1 44 88.6
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 2.2e-15 85.1 44 86.4
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 2.2e-15 85.1 47 80.9
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 2.2e-15 85.1 47 80.9
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 2.2e-15 85.1 44 86.4
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 2.2e-15 85.1 44 86.4
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 2.8e-15 84.7 44 86.4
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 2.8e-15 84.7 44 86.4
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 2.8e-15 84.7 44 86.4
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 2.8e-15 84.7 44 86.4
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 2.8e-15 84.7 44 86.4
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 3.7e-15 84.3 44 84.1
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 3.7e-15 84.3 44 84.1
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 3.7e-15 84.3 44 88.6
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 3.7e-15 84.3 44 84.1
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 4.9e-15 84.0 43 90.7
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 4.9e-15 84.0 67 62.7
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 4.9e-15 84.0 44 86.4
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 4.9e-15 84.0 44 84.1
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 6.3e-15 83.6 44 84.1
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 8.3e-15 83.2 44 84.1
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 8.3e-15 83.2 44 84.1
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 8.3e-15 83.2 44 81.8
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 8.3e-15 83.2 44 84.1
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 8.3e-15 83.2 44 84.1
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 1.1e-14 82.8 44 84.1
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 1.4e-14 82.4 44 84.1
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 1.4e-14 82.4 44 84.1
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 1.4e-14 82.4 44 84.1
Prupe.3G133300 Prunus persica HOM05D000251 ORTHO05D005532 1.4e-14 82.4 44 84.1
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 1.8e-14 82.0 44 84.1
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 1.8e-14 82.0 43 86.0
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 1.8e-14 82.0 44 84.1
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 1.8e-14 82.0 44 81.8
CiPaw.03G180300 Carya illinoinensis HOM05D000251 ORTHO05D005532 2.4e-14 81.6 44 81.8
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 2.4e-14 81.6 44 81.8
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 2.4e-14 81.6 44 81.8
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 3.1e-14 81.3 44 84.1
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 3.1e-14 81.3 44 84.1
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 3.1e-14 81.3 44 84.1
Lalb_Chr24g0399971 Lupinus albus HOM05D000251 ORTHO05D005532 3.1e-14 81.3 44 81.8
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 3.1e-14 81.3 44 84.1
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 3.1e-14 81.3 67 59.7
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 4.1e-14 80.9 44 81.8
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 4.1e-14 80.9 44 81.8
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 5.4e-14 80.5 44 81.8
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
CSS0032362 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111740 7.0e-14 80.1 65 61.5
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 81.8
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 7.0e-14 80.1 44 79.5
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 1.2e-13 79.3 44 81.8
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 1.2e-13 79.3 44 81.8
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.2e-13 79.3 44 81.8
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.2e-13 79.3 44 81.8
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 1.6e-13 79.0 44 75.0
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 1.6e-13 79.0 44 81.8
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 3.5e-13 77.8 44 79.5
HPP92_008210 Vanilla planifolia HOM05D000251 ORTHO05D005532 8.6e-12 73.2 44 72.7
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 3.3e-11 71.2 44 65.9
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 4.3e-11 70.9 44 68.2
CBR_g6606 Chara braunii HOM05D000251 ORTHO05D005532 5.6e-11 70.5 44 68.2
SMO116G0312 Selaginella moellendorffii HOM05D000251 ORTHO05D005532 5.6e-11 70.5 47 68.1
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 9.5e-11 69.7 43 69.8
SHI10378 Sapria himalayana HOM05D000251 ORTHO05D000014 9.5e-11 69.7 45 73.3
CDE11G0168 Ceratophyllum demersum HOM05D000251 ORTHO05D005532 3.6e-10 67.8 44 63.6
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 2.3e-09 65.1 44 59.1
Pp3c6_12690 Physcomitrium patens HOM05D000251 ORTHO05D005532 3.1e-09 64.7 44 61.4
SEGI_32001 Sequoiadendron giganteum HOM05D000251 ORTHO05D005532 3.1e-09 64.7 44 63.6
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 2.6e-08 61.6 44 63.6


User provided reference genes

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