Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.1e-225 785.4 419 100.0
CSS0022512 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.5e-133 479.6 386 69.7
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 9.0e-123 444.5 402 62.9
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-107 393.3 278 75.2
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.1e-95 353.6 262 70.6
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.2e-80 302.0 235 70.2
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 9.1e-75 285.0 240 65.0
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.5e-72 277.7 239 64.0
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.7e-71 273.5 235 64.3
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.0e-70 269.6 238 59.7
CSS0041871 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-69 268.1 237 65.0
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-68 264.6 235 63.4
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.4e-67 260.4 235 62.1
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.1e-67 259.6 235 62.1
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.3e-65 253.8 227 63.9
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.3e-65 253.8 227 63.9
CSS0026511 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-62 244.2 251 58.2
CSS0039815 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-62 242.3 235 60.9
CSS0038897 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-61 241.1 251 57.4
CSS0007861 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-60 238.0 251 57.0
CSS0030144 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-58 230.3 251 56.6
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 8.6e-57 225.3 339 44.2
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.5e-56 223.8 207 57.5
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 4.0e-54 216.5 216 57.9
CSS0010281 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 1.7e-49 201.1 304 44.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.4e-46 191.4 210 51.0
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 3.9e-41 173.3 189 51.3
CSS0002710 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-40 169.9 234 47.0
CSS0006192 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-34 151.0 235 43.0
CSS0039633 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-28 131.7 290 36.6
CSS0029947 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.1e-27 128.6 204 40.2
CSS0027775 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.7e-26 124.0 290 35.2
CSS0022707 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-24 117.9 290 37.6
CSS0044774 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-22 109.4 206 36.4
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 8.1e-15 85.9 202 33.7
CSS0045933 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.0e-14 83.6 127 41.7
CSS0004472 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 5.3e-14 83.2 99 48.5
CSS0003705 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.0e-13 81.3 62 62.9
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 4.5e-13 80.1 253 24.9
CSS0028719 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.9e-13 79.0 62 67.7
CSS0005008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.3e-09 67.8 99 44.4
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 3.0e-09 67.4 182 24.7
CSS0012242 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-09 67.0 56 53.6
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.9e-09 67.0 98 32.7
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 3.9e-09 67.0 153 28.1
QL11p016154 Quercus lobata HOM05D000567 ORTHO05D000224 1.1e-08 65.5 171 24.0
Rhsim02G0143100 Rhododendron simsii HOM05D000815 ORTHO05D000636 1.1e-08 65.5 117 37.6
Ca_04722_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.5e-08 65.1 259 26.6
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-08 64.7 105 35.2
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-08 64.7 188 26.1
CSS0035578 Camellia sinensis var. sinensis HOM05D002590 ORTHO05D002763 2.5e-08 64.3 51 68.6
Ca_05649_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.3e-08 63.9 205 28.3
MD02G1270300 Malus domestica HOM05D000004 ORTHO05D000224 3.3e-08 63.9 179 29.1
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-08 63.5 105 34.3
Ca_24320_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.3e-08 63.5 190 24.7
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.6e-08 62.4 200 26.0
Ca_05340_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.6e-08 62.4 157 28.0
Ca_26690_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.6e-08 62.4 173 30.1
vmacro09783 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 9.6e-08 62.4 71 36.6
vmacro12702 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 9.6e-08 62.4 71 36.6
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-07 61.6 107 32.7
Ca_19730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.6e-07 61.6 95 34.7
Ca_19797_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.6e-07 61.6 149 26.8
Ca_21023_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.6e-07 61.6 190 24.2
Ca_28216_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.6e-07 61.6 209 23.0
Ca_12718_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.1e-07 61.2 209 23.0
Ca_23986_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.1e-07 61.2 196 29.1
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-07 60.8 105 34.3
Ca_12639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.7e-07 60.5 154 27.3
Ca_14381_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.7e-07 60.5 134 28.4
Ca_18130_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.7e-07 60.5 209 23.0
Ca_19957_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.7e-07 60.5 149 26.2
Ca_24005_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.7e-07 60.5 146 26.0
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.8e-07 60.1 105 32.4
Ca_11772_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.8e-07 60.1 191 29.8
Ca_13594_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.8e-07 60.1 190 23.7
Ca_19357_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.8e-07 60.1 190 24.2
Ca_27109_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.8e-07 60.1 190 23.7
MD02G1270400 Malus domestica HOM05D000004 ORTHO05D000224 4.8e-07 60.1 178 26.4
PSO063G2857 Papaver somniferum HOM05D000004 ORTHO05D000224 4.8e-07 60.1 177 24.3
THA.LOC104822826 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 4.8e-07 60.1 130 28.5
THA.LOC109116233 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 4.8e-07 60.1 130 28.5
THA.LOC109116959 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 4.8e-07 60.1 130 28.5
Ca_19358_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000224 6.2e-07 59.7 149 26.2
QL93p2008_0037 Quercus lobata HOM05D000004 ORTHO05D000002 6.2e-07 59.7 106 34.9
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 8.1e-07 59.3 164 28.0
QL11p024965 Quercus lobata HOM05D000004 ORTHO05D000002 8.1e-07 59.3 184 27.2
vmacro05300 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.1e-07 59.3 60 38.3
vmacro05316 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.1e-07 59.3 60 38.3
vmacro14332 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.1e-07 59.3 60 38.3
vmacro17734 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.1e-07 59.3 60 38.3
vmacro23438 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.1e-07 59.3 60 38.3
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.1e-06 58.9 170 27.1
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 58.9 105 32.4
Ca_02989_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 149 26.2
Ca_03902_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-06 58.9 190 23.7
Ca_04321_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_04623_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_05352_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_05372_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_05389_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 210 23.3
Ca_09582_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_14466_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 137 31.4
Ca_19970_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_20264_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.2
Ca_21021_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 209 23.0
Ca_22887_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
Ca_23981_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 93 33.3
Ca_24203_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-06 58.9 190 23.7
Ca_27016_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-06 58.9 190 23.7
Ca_27025_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-06 58.9 190 23.7
PSO832G2831 Papaver somniferum HOM05D000004 ORTHO05D000034 1.1e-06 58.9 134 27.6
THA.LOC104822554 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 1.1e-06 58.9 130 28.5
vmacro07201 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.1e-06 58.9 112 29.5
Ca_12208_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 154 26.6
Ca_13949_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 93 33.3
Ca_14404_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 215 24.7
Ca_19727_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 190 23.7
Ca_23732_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 154 27.3
Ca_24307_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-06 58.5 209 23.0
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-06 58.5 94 31.9
Ca_05293_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.8e-06 58.2 149 26.2
Ca_23991_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.8e-06 58.2 190 23.2
Rhsim01G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.8e-06 58.2 91 33.0
SHI37742 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-06 58.2 215 28.8
Ca_04786_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.4e-06 57.8 190 24.2
Ca_14364_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.4e-06 57.8 207 24.6
Ca_19121_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.4e-06 57.8 95 34.7
Ca_28036_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.4e-06 57.8 149 26.2
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 2.4e-06 57.8 208 26.0
Ca_02779_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.1e-06 57.4 93 33.3
Ca_20530_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.1e-06 57.4 190 23.7
Ca_27413_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.1e-06 57.4 162 27.2
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 4.0e-06 57.0 157 28.0
Ca_00974_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.0e-06 57.0 171 28.1
Ca_07274_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.0e-06 57.0 93 34.4
Ca_17768_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.0e-06 57.0 130 30.8
Rhsim11G0056300 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.0e-06 57.0 193 26.4
SHI50214 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 57.0 228 26.3
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.3e-06 56.6 83 37.3
Ca_03911_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 5.3e-06 56.6 209 22.0
Oeu011745.1 Olea europaea HOM05D000004 ORTHO05D000224 5.3e-06 56.6 94 30.9
QL05p006227 Quercus lobata HOM05D000004 ORTHO05D000002 5.3e-06 56.6 208 25.5
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 5.3e-06 56.6 89 33.7
CSS0016766 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.9e-06 56.2 92 35.9
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-06 56.2 92 35.9
CANSAT54G2641 Cannabis sativa HOM05D000004 ORTHO05D000034 6.9e-06 56.2 92 32.6
CiPaw.02G045600 Carya illinoinensis HOM05D000004 ORTHO05D000224 6.9e-06 56.2 211 25.6
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-06 55.8 92 33.7
Ca_05289_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.0e-06 55.8 190 23.2
Ca_13645_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.0e-06 55.8 150 24.0
Ca_19541_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.0e-06 55.8 150 24.7
Ca_19965_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.0e-06 55.8 190 22.6
Ca_28388_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.0e-06 55.8 93 32.3
Oeu000946.1 Olea europaea HOM05D000004 ORTHO05D000224 9.0e-06 55.8 94 30.9


User provided reference genes

Program Settings