Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009087 Camellia sinensis var. sinensis HOM05D004991 ORTHO05D020246 1.3e-66 256.5 160 100.0
Actinidia01035 Actinidia chinensis HOM05D004991 ORTHO05D006690 2.4e-28 129.4 108 71.3
Dinv16894 Davidia involucrata HOM05D004991 ORTHO05D006690 3.2e-28 129.0 108 68.5
Actinidia31763 Actinidia chinensis HOM05D004991 ORTHO05D006690 6.0e-27 124.8 107 62.6
vmacro09929 Vaccinium macrocarpon HOM05D004991 ORTHO05D006690 1.3e-26 123.6 106 67.9
Nitab4.5_0002293g0040 Nicotiana tabacum HOM05D004991 ORTHO05D006690 2.3e-26 122.9 102 74.5
MBI04_g13852_MAGBIO Magnolia biondii HOM05D004991 ORTHO05D006690 5.1e-26 121.7 114 59.6
Peaxi162Scf00073g01724 Petunia axillaris HOM05D004991 ORTHO05D006690 6.7e-26 121.3 85 74.1
TAR375G0717 Trochodendron aralioides HOM05D004991 ORTHO05D006690 6.7e-26 121.3 100 63.0
Dinv34534 Davidia involucrata HOM05D004991 ORTHO05D006690 8.7e-26 120.9 109 61.5
Hma1.2p1_0502F.1_g167940 Hydrangea macrophylla HOM05D004991 ORTHO05D006690 8.7e-26 120.9 108 66.7
Hma1.2p1_0502F.1_g167960 Hydrangea macrophylla HOM05D004991 ORTHO05D035817 8.7e-26 120.9 108 66.7
Lsat_1_v5_gn_9_58401 Lactuca sativa HOM05D004991 ORTHO05D006690 8.7e-26 120.9 110 63.6
Nn1g00766 Nelumbo nucifera HOM05D004991 ORTHO05D006690 1.5e-25 120.2 100 64.0
Sopen03g024840 Solanum pennellii HOM05D004991 ORTHO05D006690 2.5e-25 119.4 102 68.6
Sopen06g002160 Solanum pennellii HOM05D004991 ORTHO05D006690 2.5e-25 119.4 102 68.6
PGSC0003DMG400008342 Solanum tuberosum HOM05D004991 ORTHO05D006690 3.3e-25 119.0 102 68.6
Cc00_g13040 Coffea canephora HOM05D004991 ORTHO05D006690 4.3e-25 118.6 109 63.3
Rhsim09G0188500 Rhododendron simsii HOM05D004991 ORTHO05D006690 7.4e-25 117.9 88 71.6
CAN.G1016.3 Capsicum annuum HOM05D004991 ORTHO05D006690 1.6e-24 116.7 85 71.8
HanXRQChr09g0252201 Helianthus annuus HOM05D004991 ORTHO05D006690 1.6e-24 116.7 84 81.0
ECA232G0310 Erigeron canadensis HOM05D004991 ORTHO05D006690 2.8e-24 115.9 84 77.4
Lj8A49G38 Lonicera japonica HOM05D004991 ORTHO05D006690 3.7e-24 115.5 83 72.3
Hund11017 Selenicereus undatus HOM05D004991 ORTHO05D006690 8.1e-24 114.4 128 56.2
Hund14297 Selenicereus undatus HOM05D004991 ORTHO05D006690 8.1e-24 114.4 91 69.2
Gohir.A09G248400 Gossypium hirsutum HOM05D004991 ORTHO05D006690 1.4e-23 113.6 85 82.4
Gorai.006G273700 Gossypium raimondii HOM05D004991 ORTHO05D006690 1.4e-23 113.6 85 82.4
Aqoxy180s003 Aquilegia oxysepala HOM05D004991 ORTHO05D006690 1.8e-23 113.2 106 66.0
Aqoxy3G02658 Aquilegia oxysepala HOM05D004991 ORTHO05D006690 1.8e-23 113.2 106 66.0
DCAR_014644 Daucus carota HOM05D004991 ORTHO05D006690 4.0e-23 112.1 87 65.5
CDE11G0390 Ceratophyllum demersum HOM05D004991 ORTHO05D006690 5.3e-23 111.7 84 76.2
GSVIVG01024473001 Vitis vinifera HOM05D004991 ORTHO05D006690 1.2e-22 110.5 88 79.5
Duzib068G0066 Durio zibethinus HOM05D004991 ORTHO05D006690 2.0e-22 109.8 54 96.3
Duzib205G0755 Durio zibethinus HOM05D004991 ORTHO05D006690 3.4e-22 109.0 55 94.5
Gorai.003G111000 Gossypium raimondii HOM05D004991 ORTHO05D006690 3.4e-22 109.0 85 77.6
Gohir.D03G105000 Gossypium hirsutum HOM05D004991 ORTHO05D006690 4.5e-22 108.6 85 77.6
Duzib084G1450 Durio zibethinus HOM05D004991 ORTHO05D006690 5.8e-22 108.2 55 94.5
Gohir.A03G061000 Gossypium hirsutum HOM05D004991 ORTHO05D006690 7.6e-22 107.8 85 70.6
Gohir.D07G049050 Gossypium hirsutum HOM05D004991 ORTHO05D006690 7.6e-22 107.8 54 94.4
Gorai.001G052200 Gossypium raimondii HOM05D004991 ORTHO05D006690 7.6e-22 107.8 54 94.4
Thecc.03G145300 Theobroma cacao HOM05D004991 ORTHO05D006690 7.6e-22 107.8 54 96.3
CANSAT56G0842 Cannabis sativa HOM05D004991 ORTHO05D006690 9.9e-22 107.5 89 69.7
Ciclev10031244m.g Citrus clementina HOM05D004991 ORTHO05D006690 9.9e-22 107.5 55 98.2
Migut.F00542 Erythranthe guttata HOM05D004991 ORTHO05D006690 9.9e-22 107.5 85 67.1
BraSC35t46003Z Brassica rapa HOM05D004991 ORTHO05D006690 1.3e-21 107.1 112 66.1
Ah.12g058550 Amaranthus hybridus HOM05D004991 ORTHO05D006690 1.7e-21 106.7 92 62.0
COL.COLO4_37308 Corchorus olitorius HOM05D004991 ORTHO05D006690 1.7e-21 106.7 54 94.4
AL8G25410 Arabidopsis lyrata HOM05D004991 ORTHO05D006690 2.9e-21 105.9 86 77.9
AT5G51150 Arabidopsis thaliana HOM05D004991 ORTHO05D006690 2.9e-21 105.9 86 77.9
AUR62030431 Chenopodium quinoa HOM05D004991 ORTHO05D006690 2.9e-21 105.9 84 66.7
Thhalv10013222m.g Eutrema salsugineum HOM05D004991 ORTHO05D006690 2.9e-21 105.9 86 76.7
Oeu030873.1 Olea europaea HOM05D004991 ORTHO05D006690 2.9e-21 105.9 84 67.9
Sp6g13360 Schrenkiella parvula HOM05D004991 ORTHO05D006690 2.9e-21 105.9 86 77.9
Lalb_Chr06g0169601 Lupinus albus HOM05D004991 ORTHO05D006690 3.8e-21 105.5 95 64.2
MD07G1241200 Malus domestica HOM05D004991 ORTHO05D006690 3.8e-21 105.5 89 68.5
Sed0023274 Sechium edule HOM05D004991 ORTHO05D006690 3.8e-21 105.5 57 87.7
SGA_v2.0_scaffold60G20847 Striga asiatica HOM05D004991 ORTHO05D006690 3.8e-21 105.5 56 87.5
BcaB08g35470 Brassica carinata HOM05D004991 ORTHO05D006690 4.9e-21 105.1 59 89.8
AUR62010468 Chenopodium quinoa HOM05D004991 ORTHO05D006690 4.9e-21 105.1 54 92.6
Manes.14G041100 Manihot esculenta HOM05D004991 ORTHO05D006690 4.9e-21 105.1 102 69.6
PSO063G0983 Papaver somniferum HOM05D004991 ORTHO05D006690 4.9e-21 105.1 88 72.7
MSTRG.27231 Avicennia marina HOM05D004991 ORTHO05D006690 6.4e-21 104.8 86 65.1
A10p07970 Brassica napus HOM05D004991 ORTHO05D006690 6.4e-21 104.8 106 68.9
CDE02G4339 Ceratophyllum demersum HOM05D004991 ORTHO05D006690 6.4e-21 104.8 84 66.7
PSO782G2232 Papaver somniferum HOM05D004991 ORTHO05D006690 6.4e-21 104.8 87 73.6
Aa31LG3G7660 Aethionema arabicum HOM05D004991 ORTHO05D006690 8.4e-21 104.4 86 75.6
unitig_46.g18758 Utricularia gibba HOM05D004991 ORTHO05D006690 8.4e-21 104.4 84 64.3
BcaC01g06096 Brassica carinata HOM05D004991 ORTHO05D006690 1.1e-20 104.0 52 98.1
C03p19160 Brassica napus HOM05D004991 ORTHO05D006690 1.1e-20 104.0 52 98.1
BolC3t14304H Brassica oleracea HOM05D004991 ORTHO05D006690 1.1e-20 104.0 52 98.1
Carub.0008s1119 Capsella rubella HOM05D004991 ORTHO05D006690 1.1e-20 104.0 52 98.1
THA.LOC104811541 Tarenaya hassleriana HOM05D004991 ORTHO05D006690 1.1e-20 104.0 52 98.1
Cpa.g.sc13.221 Carica papaya HOM05D004991 ORTHO05D006690 1.4e-20 103.6 86 80.2
FAN06G0285 Fragaria x ananassa HOM05D004991 ORTHO05D020246 1.4e-20 103.6 79 72.2
EL10Ac5g12571 Beta vulgaris HOM05D004991 ORTHO05D006690 1.9e-20 103.2 54 92.6
BcaC04g20727 Brassica carinata HOM05D004991 ORTHO05D006690 1.9e-20 103.2 106 67.9
C09p39840 Brassica napus HOM05D004991 ORTHO05D006690 1.9e-20 103.2 106 67.9
BolC9t56883H Brassica oleracea HOM05D004991 ORTHO05D006690 1.9e-20 103.2 106 67.9
Eucgr.A02933 Eucalyptus grandis HOM05D004991 ORTHO05D006690 3.2e-20 102.4 55 92.7
FvH4_7g26640 Fragaria vesca HOM05D004991 ORTHO05D006690 3.2e-20 102.4 55 94.5
FAN03G3358 Fragaria x ananassa HOM05D004991 ORTHO05D006690 3.2e-20 102.4 55 94.5
Lj5g0020821 Lotus japonicus HOM05D004991 ORTHO05D006690 3.2e-20 102.4 55 90.9
RcHm_v2.0_Chr1g0373261 Rosa chinensis HOM05D004991 ORTHO05D006690 3.2e-20 102.4 55 94.5
A03p16270 Brassica napus HOM05D004991 ORTHO05D006690 4.2e-20 102.1 52 96.2
BraA03t10918Z Brassica rapa HOM05D004991 ORTHO05D006690 4.2e-20 102.1 52 96.2
Glyma.10G191600 Glycine max HOM05D004991 ORTHO05D006690 4.2e-20 102.1 96 62.5
ClCG01G004880 Citrullus lanatus HOM05D004991 ORTHO05D006690 5.5e-20 101.7 62 82.3
Lalb_Chr21g0312591 Lupinus albus HOM05D004991 ORTHO05D006690 7.1e-20 101.3 93 63.4
Sabra15G0133000 Salix brachista HOM05D004991 ORTHO05D006690 7.1e-20 101.3 85 77.6
VMungo0720G1976 Vigna mungo HOM05D004991 ORTHO05D006690 7.1e-20 101.3 86 66.3
FAN06G4210 Fragaria x ananassa HOM05D004991 ORTHO05D020246 9.3e-20 100.9 55 92.7
Manes.06G129800 Manihot esculenta HOM05D004991 ORTHO05D006690 9.3e-20 100.9 55 89.1
PGR042G3269 Punica granatum HOM05D004991 ORTHO05D006690 9.3e-20 100.9 55 90.9
TWI39G0803 Tripterygium wilfordii HOM05D004991 ORTHO05D006690 9.3e-20 100.9 89 77.5
Potri.015G111200 Populus trichocarpa HOM05D004991 ORTHO05D006690 1.2e-19 100.5 85 74.1
Cfa013604 Carpinus fangiana HOM05D004991 ORTHO05D006690 1.6e-19 100.1 55 90.9
CiPaw.07G183100 Carya illinoinensis HOM05D004991 ORTHO05D006690 1.6e-19 100.1 56 91.1
Haze_22225 Corylus avellana HOM05D004991 ORTHO05D006690 1.6e-19 100.1 55 90.9
Sc17g0004550 Simmondsia chinensis HOM05D004991 ORTHO05D006690 1.6e-19 100.1 90 64.4
arahy.Tifrunner.gnm1.ann1.A0K4XE Arachis hypogaea HOM05D004991 ORTHO05D006690 2.1e-19 99.8 55 87.3
arahy.Tifrunner.gnm1.ann1.GMTF4T Arachis hypogaea HOM05D004991 ORTHO05D006690 2.1e-19 99.8 55 87.3
FAN06G1714 Fragaria x ananassa HOM05D004991 ORTHO05D006690 2.1e-19 99.8 54 94.4
Glyma.20G198600 Glycine max HOM05D004991 ORTHO05D006690 2.1e-19 99.8 93 72.0
Phvul.L001785 Phaseolus vulgaris HOM05D004991 ORTHO05D006690 2.1e-19 99.8 90 67.8
MELO3C005445.2 Cucumis melo HOM05D004991 ORTHO05D006690 2.7e-19 99.4 60 83.3
Medtr1g072830 Medicago truncatula HOM05D004991 ORTHO05D006690 2.7e-19 99.4 55 89.1
Potri.012G113700 Populus trichocarpa HOM05D004991 ORTHO05D006690 2.7e-19 99.4 85 64.7
Prupe.2G270300 Prunus persica HOM05D004991 ORTHO05D006690 2.7e-19 99.4 89 65.2
Sed0002589 Sechium edule HOM05D004991 ORTHO05D006690 2.7e-19 99.4 52 90.4
TWI14G0627 Tripterygium wilfordii HOM05D004991 ORTHO05D006690 2.7e-19 99.4 89 76.4
Atru.chr6.1976 Acer truncatum HOM05D004991 ORTHO05D006690 3.5e-19 99.0 54 94.4
Sabra12G0082800 Salix brachista HOM05D004991 ORTHO05D006690 3.5e-19 99.0 85 64.7
CsaV3_5G005110 Cucumis sativus L. HOM05D004991 ORTHO05D006690 4.6e-19 98.6 60 81.7
Ca_09787_v3 Cicer arietinum L. HOM05D004991 ORTHO05D006690 7.9e-19 97.8 55 87.3
BcaC01g06078 Brassica carinata HOM05D004991 ORTHO05D006690 5.1e-18 95.1 52 94.2
Psat6g140160 Pisum sativum HOM05D004991 ORTHO05D006690 5.1e-18 95.1 55 87.3
ATR0665G298 Amborella trichopoda HOM05D004991 ORTHO05D006690 8.7e-18 94.4 52 86.5
QL09p027386 Quercus lobata HOM05D004991 ORTHO05D006690 8.7e-18 94.4 56 85.7
Glyma.02G174600 Glycine max HOM05D004991 ORTHO05D006690 1.5e-17 93.6 93 66.7
Sed0019867 Sechium edule HOM05D004991 ORTHO05D006690 3.7e-16 89.0 54 81.5
Zm00001eb322080 Zea mays HOM05D004991 ORTHO05D006690 8.2e-16 87.8 85 58.8
Zm00001eb322110 Zea mays HOM05D004991 ORTHO05D006690 8.2e-16 87.8 85 58.8
AagrBONN_evm.TU.Sc2ySwM_344.798 Anthoceros agrestis HOM05D004991 ORTHO05D006690 9.0e-15 84.3 55 74.5
Mapoly0103s0064 Marchantia polymorpha HOM05D004991 ORTHO05D006690 1.5e-14 83.6 85 54.1
Mapoly0175s0021 Marchantia polymorpha HOM05D004991 ORTHO05D006690 7.6e-14 81.3 85 52.9
Mapoly0001s0004 Marchantia polymorpha HOM05D004991 ORTHO05D006690 2.9e-13 79.3 85 51.8
Pp3c2_28300 Physcomitrium patens HOM05D004991 ORTHO05D006690 1.1e-12 77.4 53 67.9
SMO364G0598 Selaginella moellendorffii HOM05D004991 ORTHO05D006690 2.5e-12 76.3 53 67.9
Pp3c1_10120 Physcomitrium patens HOM05D004991 ORTHO05D006690 3.2e-12 75.9 53 66.0
FAN06G2940 Fragaria x ananassa HOM05D004991 ORTHO05D035817 4.6e-11 72.0 37 94.6
FAN06G3183 Fragaria x ananassa HOM05D004991 ORTHO05D035817 4.6e-11 72.0 37 94.6
CBR_g55399 Chara braunii HOM05D004991 ORTHO05D006690 6.3e-08 61.6 55 56.4


User provided reference genes

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