Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 6.4e-76 287.3 146 100.0
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 7.1e-67 257.3 146 93.8
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.2e-36 156.0 153 62.7
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 9.4e-35 150.6 154 60.4
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 1.9e-32 142.9 151 55.6
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.3e-31 140.2 151 57.0
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 3.2e-27 125.6 155 49.0
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.6e-26 123.2 130 58.5
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.6e-26 123.2 154 50.0
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 4.7e-26 121.7 150 52.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.1e-24 117.1 160 46.9
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 1.1e-22 110.5 135 51.9
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.4e-22 110.2 158 46.2
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 2.4e-22 109.4 156 45.5
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 5.3e-22 108.2 164 45.1
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 7.0e-22 107.8 159 45.9
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.2e-21 107.1 158 45.6
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 4.5e-21 105.1 155 45.2
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 5.9e-21 104.8 165 47.3
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 5.0e-20 101.7 127 48.8
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 3.2e-19 99.0 164 44.5
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 4.2e-19 98.6 142 42.3
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 4.2e-19 98.6 159 41.5
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 4.7e-18 95.1 159 44.0
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 8.0e-18 94.4 152 42.1
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 3.0e-17 92.4 162 40.7
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 8.8e-17 90.9 158 41.1
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 2.0e-16 89.7 157 42.0
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 3.3e-16 89.0 159 45.3
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 3.3e-16 89.0 154 42.9
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.2e-15 86.3 156 42.3
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 3.7e-15 85.5 156 37.8
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 4.8e-15 85.1 144 38.9
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.1e-14 82.4 156 39.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 4.1e-14 82.0 159 42.1
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 4.1e-14 82.0 123 43.1
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 7.0e-14 81.3 154 37.0
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 9.1e-14 80.9 156 41.0
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 1.2e-13 80.5 156 41.0
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 1.2e-13 80.5 151 39.1
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 7.7e-13 77.8 161 37.9
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 1.0e-12 77.4 161 36.0
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 2.9e-12 75.9 164 37.2
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.9e-12 75.9 161 37.3
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.9e-12 75.9 164 37.2
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.9e-12 75.9 163 37.4
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 3.8e-12 75.5 150 36.0
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.8e-12 75.5 162 37.0
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 5.0e-12 75.1 164 33.5
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 6.5e-12 74.7 157 33.8
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 8.5e-12 74.3 145 40.7
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 3.2e-11 72.4 161 35.4
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 4.2e-11 72.0 74 56.8
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.5e-11 71.6 164 36.6
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 9.4e-11 70.9 157 35.0
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 9.4e-11 70.9 155 35.5
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 9.4e-11 70.9 143 41.3
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.2e-10 70.5 154 36.4
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 1.2e-10 70.5 163 33.7
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 1.6e-10 70.1 156 35.9
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 2.7e-10 69.3 159 34.6
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 1.4e-09 67.0 129 36.4
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 1.8e-09 66.6 159 30.8
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 1.8e-09 66.6 159 30.8
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 1.8e-09 66.6 159 30.8
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 5.2e-09 65.1 148 36.5
Actinidia38376 Actinidia chinensis HOM05D007903 ORTHO05D009925 1.5e-08 63.5 60 61.7
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 1.5e-08 63.5 152 36.8
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 1.5e-08 63.5 154 37.7
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 5.7e-08 61.6 162 31.5
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 6.3e-07 58.2 152 36.2


User provided reference genes

Program Settings