Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009075 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 2.5e-43 178.7 116 100.0
CSS0016854 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 1.2e-32 143.3 104 95.2
CSS0034138 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 4.7e-21 104.8 104 76.0
Actinidia06700 Actinidia chinensis HOM05D001901 ORTHO05D001850 1.3e-18 96.7 104 76.9
Actinidia18591 Actinidia chinensis HOM05D001901 ORTHO05D001850 2.4e-17 92.4 104 73.1
CSS0000065 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 1.2e-16 90.1 104 67.3
Lj2C31G15 Lonicera japonica HOM05D001901 ORTHO05D001850 1.6e-16 89.7 104 51.9
Dinv09597 Davidia involucrata HOM05D001901 ORTHO05D001850 2.0e-16 89.4 105 63.8
Rhsim03G0099800 Rhododendron simsii HOM05D001901 ORTHO05D001850 7.7e-16 87.4 104 70.2
TAR636G1819 Trochodendron aralioides HOM05D001901 ORTHO05D001850 6.5e-15 84.3 104 47.1
DCAR_006342 Daucus carota HOM05D001901 ORTHO05D001850 3.2e-14 82.0 105 47.6
Dinv02031 Davidia involucrata HOM05D001901 ORTHO05D001850 7.2e-14 80.9 105 65.7
Solyc11g007110.2 Solanum lycopersicum HOM05D001901 ORTHO05D001850 2.1e-13 79.3 107 48.6
PGSC0003DMG400019487 Solanum tuberosum HOM05D001901 ORTHO05D001850 2.1e-13 79.3 107 61.7
Cc02_g09820 Coffea canephora HOM05D001901 ORTHO05D001850 2.7e-13 79.0 106 51.9
Dinv11851 Davidia involucrata HOM05D001901 ORTHO05D001850 3.6e-13 78.6 104 65.4
Duzib106G0363 Durio zibethinus HOM05D001901 ORTHO05D001850 3.6e-13 78.6 105 50.5
TAR633G0842 Trochodendron aralioides HOM05D001901 ORTHO05D001850 4.7e-13 78.2 104 49.0
Sopen11g003030 Solanum pennellii HOM05D001901 ORTHO05D001850 8.0e-13 77.4 107 60.7
CANSAT56G1512 Cannabis sativa HOM05D001901 ORTHO05D001850 1.0e-12 77.0 105 49.5
Lj3C928T15 Lonicera japonica HOM05D001901 ORTHO05D001850 1.0e-12 77.0 111 47.7
Rhsim09G0142800 Rhododendron simsii HOM05D001901 ORTHO05D001850 1.0e-12 77.0 127 40.9
Cfa011264 Carpinus fangiana HOM05D001901 ORTHO05D001850 1.4e-12 76.6 105 50.5
Oeu025593.4 Olea europaea HOM05D001901 ORTHO05D001850 1.4e-12 76.6 107 47.7
PGR044G0874 Punica granatum HOM05D001901 ORTHO05D001850 1.4e-12 76.6 107 48.6
Peaxi162Scf00173g00611 Petunia axillaris HOM05D001901 ORTHO05D001850 5.2e-12 74.7 108 45.4
Duzib128G0410 Durio zibethinus HOM05D001901 ORTHO05D001850 6.8e-12 74.3 105 50.5
ECA238G2260 Erigeron canadensis HOM05D001901 ORTHO05D001850 6.8e-12 74.3 105 62.9
Lsat_1_v5_gn_2_104661 Lactuca sativa HOM05D001901 ORTHO05D001850 6.8e-12 74.3 108 53.7
Gohir.A10G198000 Gossypium hirsutum HOM05D001901 ORTHO05D001850 8.8e-12 73.9 105 50.5
Gohir.D10G205100 Gossypium hirsutum HOM05D001901 ORTHO05D001850 8.8e-12 73.9 105 50.5
Gorai.011G230000 Gossypium raimondii HOM05D001901 ORTHO05D001850 8.8e-12 73.9 105 50.5
TWI15G0670 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 1.2e-11 73.6 105 51.4
TWI38G1487 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 5.7e-11 71.2 107 47.7
CiPaw.13G038500 Carya illinoinensis HOM05D001901 ORTHO05D001850 9.8e-11 70.5 108 45.4
Haze_02514 Corylus avellana HOM05D001901 ORTHO05D001850 1.3e-10 70.1 112 45.5
Ca_10509_v3 Cicer arietinum L. HOM05D001901 ORTHO05D001850 1.7e-10 69.7 106 42.5
Oeu026576.1 Olea europaea HOM05D001901 ORTHO05D001850 1.7e-10 69.7 126 39.7
Thecc.10G107100 Theobroma cacao HOM05D001901 ORTHO05D001850 1.7e-10 69.7 105 48.6
TWI63G1270 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 1.7e-10 69.7 106 50.0
ClCG05G021740 Citrullus lanatus HOM05D001901 ORTHO05D001850 2.2e-10 69.3 113 46.9
HanXRQChr11g0321281 Helianthus annuus HOM05D001901 ORTHO05D001850 2.2e-10 69.3 104 43.3
Medtr1g092900 Medicago truncatula HOM05D001901 ORTHO05D001850 2.2e-10 69.3 106 42.5
HanXRQChr05g0146921 Helianthus annuus HOM05D001901 ORTHO05D001850 4.8e-10 68.2 101 42.6
Ciclev10031477m.g Citrus clementina HOM05D001901 ORTHO05D001850 6.3e-10 67.8 107 45.8
MELO3C012355.2 Cucumis melo HOM05D001901 ORTHO05D001850 6.3e-10 67.8 105 46.7
Manes.07G087800 Manihot esculenta HOM05D001901 ORTHO05D001850 6.3e-10 67.8 106 46.2
Cpa.g.sc183.7 Carica papaya HOM05D001901 ORTHO05D001850 8.3e-10 67.4 105 58.1
Lalb_Chr06g0170211 Lupinus albus HOM05D001901 ORTHO05D001850 1.1e-09 67.0 108 45.4
Nn2g14117 Nelumbo nucifera HOM05D001901 ORTHO05D001850 1.1e-09 67.0 105 42.9
Nn6g34943 Nelumbo nucifera HOM05D001901 ORTHO05D001850 1.1e-09 67.0 104 47.1
Phvul.007G103200 Phaseolus vulgaris HOM05D001901 ORTHO05D001850 1.4e-09 66.6 107 43.9
SGA_v2.0_scaffold62G21344 Striga asiatica HOM05D001901 ORTHO05D001850 1.4e-09 66.6 95 46.3
Manes.10G058300 Manihot esculenta HOM05D001901 ORTHO05D001850 1.8e-09 66.2 106 47.2
Psat6g177680 Pisum sativum HOM05D001901 ORTHO05D001850 2.4e-09 65.9 105 44.8
VMungo0720G1116 Vigna mungo HOM05D001901 ORTHO05D001850 2.4e-09 65.9 107 43.9
Sc09g0005470 Simmondsia chinensis HOM05D001901 ORTHO05D001850 3.1e-09 65.5 102 45.1
HanXRQChr11g0342221 Helianthus annuus HOM05D001901 ORTHO05D001850 4.1e-09 65.1 104 64.4
Lj5g0016568 Lotus japonicus HOM05D001901 ORTHO05D001850 4.1e-09 65.1 105 44.8
Potri.010G237500 Populus trichocarpa HOM05D001901 ORTHO05D001850 4.1e-09 65.1 106 47.2
FvH4_7g05730 Fragaria vesca HOM05D001901 ORTHO05D001850 5.4e-09 64.7 105 44.8
Glyma.10G203800 Glycine max HOM05D001901 ORTHO05D001850 5.4e-09 64.7 104 41.3
Atru.chr12.1005 Acer truncatum HOM05D001901 ORTHO05D001850 7.0e-09 64.3 105 46.7
FAN01G1784 Fragaria x ananassa HOM05D001901 ORTHO05D001850 7.0e-09 64.3 105 44.8
FAN06G0939 Fragaria x ananassa HOM05D001901 ORTHO05D001850 7.0e-09 64.3 105 44.8
FAN10G0070 Fragaria x ananassa HOM05D001901 ORTHO05D001850 7.0e-09 64.3 105 44.8
TAR369G0706 Trochodendron aralioides HOM05D001901 ORTHO05D001850 7.0e-09 64.3 104 41.3
FAN03G1021 Fragaria x ananassa HOM05D001901 ORTHO05D001850 9.1e-09 63.9 105 44.8
Lalb_Chr21g0313311 Lupinus albus HOM05D001901 ORTHO05D001850 9.1e-09 63.9 106 54.7
Prupe.2G079700 Prunus persica HOM05D001901 ORTHO05D001850 9.1e-09 63.9 105 45.7
QL04p044842 Quercus lobata HOM05D001901 ORTHO05D001850 9.1e-09 63.9 120 37.5
Sabra10G0185900 Salix brachista HOM05D001901 ORTHO05D001850 9.1e-09 63.9 106 46.2
Ah.06g187720 Amaranthus hybridus HOM05D001901 ORTHO05D001850 1.6e-08 63.2 103 43.7
MSTRG.27533 Avicennia marina HOM05D001901 ORTHO05D001850 1.6e-08 63.2 96 40.6
Glyma.20G186800 Glycine max HOM05D001901 ORTHO05D001850 1.6e-08 63.2 106 41.5
Hund22299 Selenicereus undatus HOM05D001901 ORTHO05D001850 1.6e-08 63.2 108 45.4
SGA_v2.0_scaffold13G06486 Striga asiatica HOM05D001901 ORTHO05D004049 1.6e-08 63.2 109 40.4
TPR.G18688 Trifolium pratense HOM05D001901 ORTHO05D001850 2.0e-08 62.8 110 41.8
EL10Ac4g08640 Beta vulgaris HOM05D001901 ORTHO05D001850 2.7e-08 62.4 106 41.5
RcHm_v2.0_Chr1g0332761 Rosa chinensis HOM05D001901 ORTHO05D001850 2.7e-08 62.4 105 43.8
HPP92_005466 Vanilla planifolia HOM05D001901 ORTHO05D001850 2.7e-08 62.4 104 38.5
arahy.Tifrunner.gnm1.ann1.1Z1ZPG Arachis hypogaea HOM05D001901 ORTHO05D001850 3.5e-08 62.0 104 52.9
arahy.Tifrunner.gnm1.ann1.AMJ10Y Arachis hypogaea HOM05D001901 ORTHO05D001850 3.5e-08 62.0 104 52.9
CAN.G251.5 Capsicum annuum HOM05D001901 ORTHO05D001850 3.5e-08 62.0 104 57.7
PSO339G5608 Papaver somniferum HOM05D001901 ORTHO05D001850 3.5e-08 62.0 106 54.7
SHI21302 Sapria himalayana HOM05D001901 ORTHO05D001850 3.5e-08 62.0 111 38.7
MD02G1255700 Malus domestica HOM05D001901 ORTHO05D001850 5.9e-08 61.2 105 43.8
PSO384G4327 Papaver somniferum HOM05D001901 ORTHO05D001850 5.9e-08 61.2 106 55.7
Eucgr.G02696 Eucalyptus grandis HOM05D001901 ORTHO05D001850 7.7e-08 60.8 104 41.3
CDE06G1341 Ceratophyllum demersum HOM05D001901 ORTHO05D001850 1.0e-07 60.5 104 39.4
CDE08G0472 Ceratophyllum demersum HOM05D001901 ORTHO05D001850 1.7e-07 59.7 104 43.3
THA.LOC104825357 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 1.7e-07 59.7 105 42.9
THA.LOC104801230 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 2.3e-07 59.3 110 41.8
ATR0820G142 Amborella trichopoda HOM05D001901 ORTHO05D001850 3.8e-07 58.5 104 37.5
Lj5g0019607 Lotus japonicus HOM05D001901 ORTHO05D001850 3.8e-07 58.5 104 40.4
SalBow6G1394 Salvia bowleyana HOM05D001901 ORTHO05D001850 3.8e-07 58.5 104 41.3
Nitab4.5_0003774g0060 Nicotiana tabacum HOM05D001901 ORTHO05D001850 5.0e-07 58.2 107 40.2
unitig_46.g18635 Utricularia gibba HOM05D001901 ORTHO05D001850 5.0e-07 58.2 93 37.6
Lalb_Chr02g0151711 Lupinus albus HOM05D001901 ORTHO05D001850 6.6e-07 57.8 106 50.9
Aqoxy2G01221 Aquilegia oxysepala HOM05D001901 ORTHO05D001850 8.6e-07 57.4 106 40.6
CAN.G730.31 Capsicum annuum HOM05D001901 ORTHO05D001850 1.5e-06 56.6 105 40.0
Migut.F00906 Erythranthe guttata HOM05D001901 ORTHO05D001850 1.5e-06 56.6 93 38.7
AUR62037672 Chenopodium quinoa HOM05D001901 ORTHO05D001850 2.5e-06 55.8 106 50.9
DCAR_018570 Daucus carota HOM05D001901 ORTHO05D001850 2.5e-06 55.8 96 37.5
MSTRG.9088 Avicennia marina HOM05D001901 ORTHO05D001850 3.3e-06 55.5 95 37.9
HanXRQChr07g0194241 Helianthus annuus HOM05D001901 ORTHO05D001850 9.5e-06 53.9 108 37.0


User provided reference genes

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