Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.8e-185 652.5 343 100.0
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 5.9e-181 637.5 343 97.7
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.4e-137 493.4 342 76.6
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 1.6e-122 443.4 343 69.7
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.8e-122 441.8 342 70.2
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.4e-121 440.3 341 70.1
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 2.0e-120 436.4 347 68.9
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 3.4e-120 435.6 347 68.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 1.6e-117 426.8 348 67.2
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 5.1e-116 421.8 348 67.2
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 8.7e-116 421.0 342 69.9
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.1e-115 420.6 343 65.9
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.5e-115 420.2 348 66.4
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 2.5e-115 419.5 344 67.4
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 2.5e-115 419.5 346 65.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 4.8e-114 415.2 345 65.2
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.4e-113 412.9 343 65.0
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.4e-113 412.9 344 65.7
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 4.0e-113 412.1 344 66.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 4.0e-113 412.1 343 64.7
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 5.8e-112 408.3 344 65.1
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.0e-111 407.5 343 64.4
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 3.8e-111 405.6 333 67.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 6.5e-111 404.8 345 65.2
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 2.5e-110 402.9 346 63.9
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.2e-110 402.5 346 63.6
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 4.2e-110 402.1 351 62.7
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.1e-110 401.4 343 64.4
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.2e-109 400.6 343 64.4
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.1e-109 399.8 345 65.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 3.5e-109 399.1 345 63.5
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.0e-109 398.3 345 64.3
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.0e-108 397.5 295 71.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 1.0e-108 397.5 344 64.2
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 5.1e-108 395.2 344 64.2
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 8.7e-108 394.4 344 61.6
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.5e-107 393.7 346 62.1
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.5e-107 393.7 346 62.1
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.5e-107 393.7 344 61.6
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.9e-107 393.3 349 62.5
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 4.3e-107 392.1 344 60.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 1.3e-106 390.6 344 63.1
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 1.6e-106 390.2 345 59.4
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 2.8e-106 389.4 345 61.4
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.8e-106 389.4 344 63.1
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.8e-106 388.7 345 62.0
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 6.3e-106 388.3 342 62.6
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 8.2e-106 387.9 346 61.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 9.0e-105 384.4 352 63.4
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.2e-104 384.0 346 63.3
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.5e-104 383.6 345 62.9
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 2.0e-104 383.3 348 60.3
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 3.4e-104 382.5 347 61.1
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 3.4e-104 382.5 351 61.8
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 4.5e-104 382.1 350 62.3
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 5.9e-104 381.7 345 60.0
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.0e-103 380.9 343 60.9
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 5.0e-103 378.6 348 62.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 2.5e-102 376.3 283 67.8
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.5e-102 376.3 346 62.4
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 5.5e-102 375.2 346 58.4
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 8.8e-100 367.9 346 57.8
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 4.3e-99 365.5 354 56.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.7e-98 363.6 345 59.7
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.1e-97 360.9 274 71.5
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.5e-96 357.1 351 57.5
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 2.9e-95 352.8 336 61.3
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 3.8e-95 352.4 280 65.4
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.2e-94 349.4 312 62.5
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.0e-92 344.4 281 63.3
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 4.8e-90 335.5 276 62.7
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 8.2e-90 334.7 347 57.9
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 1.1e-89 334.3 347 57.3
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.8e-89 333.6 340 58.5
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.8e-89 333.6 347 57.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 9.1e-89 331.3 347 56.2
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 2.0e-88 330.1 351 57.8
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 4.5e-88 328.9 343 53.9
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.3e-87 327.4 347 56.8
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 2.9e-87 326.2 347 56.5
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.9e-86 323.6 340 57.4
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.9e-86 323.6 340 57.4
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 2.5e-86 323.2 351 56.1
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.8e-84 317.0 350 55.4
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 4.4e-83 312.4 348 56.0
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 2.2e-82 310.1 318 58.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.6e-80 303.1 348 54.6
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 4.4e-75 285.8 316 50.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 2.2e-74 283.5 206 71.8
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.0e-60 238.0 329 42.9
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.8e-60 237.3 184 63.0
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.2e-56 224.6 308 46.4
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 2.8e-53 213.4 133 75.9
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 5.2e-52 209.1 201 59.2
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.4e-49 200.3 121 81.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 7.8e-48 195.3 271 38.7
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.1e-33 146.4 273 33.7
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 2.1e-32 144.1 248 44.0
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 6.0e-32 142.5 275 34.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 3.6e-29 133.3 115 64.3
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 5.2e-28 129.4 215 44.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 3.8e-26 123.2 135 50.4
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.7e-23 114.4 115 53.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.7e-18 97.8 263 27.0
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 6.9e-12 75.9 107 39.3
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 1.4e-09 68.2 237 25.3


User provided reference genes

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