Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009053 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 7.9e-141 503.8 266 100.0
CSS0031471 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 2.6e-123 445.7 290 83.1
CSS0003445 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 2.7e-120 435.6 272 87.1
Rhsim12G0036000 Rhododendron simsii HOM05D001304 ORTHO05D007800 2.1e-101 372.9 282 71.6
Dinv11004 Davidia involucrata HOM05D001304 ORTHO05D007800 6.4e-98 361.3 285 69.5
Migut.K00684 Erythranthe guttata HOM05D001304 ORTHO05D007800 7.3e-94 347.8 281 66.5
Lj6C820G6 Lonicera japonica HOM05D001304 ORTHO05D007800 3.1e-92 342.4 284 66.9
MSTRG.532 Avicennia marina HOM05D001304 ORTHO05D007800 5.4e-89 331.6 285 63.5
Ciclev10033657m.g Citrus clementina HOM05D001304 ORTHO05D007800 5.4e-89 331.6 282 63.5
Prupe.1G234500 Prunus persica HOM05D001304 ORTHO05D007800 2.0e-88 329.7 286 63.3
Manes.12G016550 Manihot esculenta HOM05D001304 ORTHO05D007800 2.7e-88 329.3 281 61.6
TAR629G3532 Trochodendron aralioides HOM05D001304 ORTHO05D007800 7.8e-88 327.8 279 64.2
SalBow2G1645 Salvia bowleyana HOM05D001304 ORTHO05D007800 3.9e-87 325.5 285 61.8
Potri.010G054466 Populus trichocarpa HOM05D001304 ORTHO05D007800 7.3e-86 321.2 283 62.2
SGA_v2.0_scaffold64G21891 Striga asiatica HOM05D001304 ORTHO05D007800 9.5e-86 320.9 285 62.8
MD13G1110200 Malus domestica HOM05D001304 ORTHO05D007800 1.6e-85 320.1 286 62.9
FAN07G2070 Fragaria x ananassa HOM05D001304 ORTHO05D007800 4.7e-85 318.5 282 62.1
RcHm_v2.0_Chr4g0431491 Rosa chinensis HOM05D001304 ORTHO05D007800 8.1e-85 317.8 281 61.6
Cfa009301 Carpinus fangiana HOM05D001304 ORTHO05D007800 2.3e-84 316.2 283 63.3
Gorai.005G172700 Gossypium raimondii HOM05D001304 ORTHO05D007800 3.1e-84 315.8 281 59.8
Gohir.A03G129900 Gossypium hirsutum HOM05D001304 ORTHO05D007800 4.0e-84 315.5 281 59.8
Sabra10G0050400 Salix brachista HOM05D001304 ORTHO05D007800 4.0e-84 315.5 283 61.1
Gohir.D02G153600 Gossypium hirsutum HOM05D001304 ORTHO05D007800 5.2e-84 315.1 281 59.8
CiPaw.06G063200 Carya illinoinensis HOM05D001304 ORTHO05D007800 6.8e-84 314.7 286 61.5
Oeu041694.1 Olea europaea HOM05D001304 ORTHO05D007800 6.8e-84 314.7 311 56.6
FvH4_4g24570 Fragaria vesca HOM05D001304 ORTHO05D007800 8.9e-84 314.3 282 61.3
FAN12G0304 Fragaria x ananassa HOM05D001304 ORTHO05D007800 8.9e-84 314.3 282 61.3
QL03p055365 Quercus lobata HOM05D001304 ORTHO05D007800 1.5e-83 313.5 281 61.2
Cc11_g16440 Coffea canephora HOM05D001304 ORTHO05D007800 2.0e-83 313.2 283 60.1
Lalb_Chr11g0075661 Lupinus albus HOM05D001304 ORTHO05D007800 2.0e-83 313.2 292 59.2
Thecc.02G272500 Theobroma cacao HOM05D001304 ORTHO05D007800 2.0e-83 313.2 280 60.4
Ca_16492_v3 Cicer arietinum L. HOM05D001304 ORTHO05D007800 2.6e-83 312.8 291 59.5
Nn4g22445 Nelumbo nucifera HOM05D001304 ORTHO05D007800 2.6e-83 312.8 276 62.0
CANSAT21G0986 Cannabis sativa HOM05D001304 ORTHO05D007800 3.4e-83 312.4 284 59.2
VMungo1383G2972 Vigna mungo HOM05D001304 ORTHO05D007800 5.8e-83 311.6 290 59.3
ECA233G6138 Erigeron canadensis HOM05D001304 ORTHO05D007800 9.9e-83 310.8 288 58.7
FAN17G0228 Fragaria x ananassa HOM05D001304 ORTHO05D007800 1.3e-82 310.5 282 61.0
PGR102G3374 Punica granatum HOM05D001304 ORTHO05D007800 1.7e-82 310.1 284 58.8
Glyma.18G010200 Glycine max HOM05D001304 ORTHO05D007800 2.2e-82 309.7 289 58.8
Lsat_1_v5_gn_8_151441 Lactuca sativa HOM05D001304 ORTHO05D007800 8.3e-82 307.8 289 58.5
MBI11_g16648_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D007800 1.9e-81 306.6 290 58.6
HanXRQChr12g0372151 Helianthus annuus HOM05D001304 ORTHO05D007800 2.4e-81 306.2 293 58.4
Phvul.001G258500 Phaseolus vulgaris HOM05D001304 ORTHO05D007800 2.4e-81 306.2 289 58.5
TWI75G0249 Tripterygium wilfordii HOM05D001304 ORTHO05D007800 2.4e-81 306.2 284 59.5
Aqoxy5G03558 Aquilegia oxysepala HOM05D001304 ORTHO05D007800 5.4e-81 305.1 286 58.7
Medtr3g086000 Medicago truncatula HOM05D001304 ORTHO05D007800 5.4e-81 305.1 289 57.8
Atru.chr11.2222 Acer truncatum HOM05D001304 ORTHO05D007800 7.1e-81 304.7 286 60.5
ClCG08G017380 Citrullus lanatus HOM05D001304 ORTHO05D007800 9.2e-81 304.3 293 57.0
MELO3C010721.2 Cucumis melo HOM05D001304 ORTHO05D007800 1.2e-80 303.9 293 57.3
TPR.G33396 Trifolium pratense HOM05D001304 ORTHO05D007800 1.6e-80 303.5 291 57.7
PSO782G2509 Papaver somniferum HOM05D001304 ORTHO05D007800 6.0e-80 301.6 293 55.6
CsaV3_2G025240 Cucumis sativus L. HOM05D001304 ORTHO05D007800 7.8e-80 301.2 293 57.3
DCAR_026485 Daucus carota HOM05D001304 ORTHO05D007800 1.0e-79 300.8 284 56.7
Solyc09g014890.3 Solanum lycopersicum HOM05D001304 ORTHO05D007800 1.0e-79 300.8 283 56.2
Eucgr.B03454 Eucalyptus grandis HOM05D001304 ORTHO05D007800 1.3e-79 300.4 285 56.5
Peaxi162Scf00160g00921 Petunia axillaris HOM05D001304 ORTHO05D007800 1.3e-79 300.4 293 55.3
Psat5g093160 Pisum sativum HOM05D001304 ORTHO05D007800 1.3e-79 300.4 289 56.7
COL.COLO4_23601 Corchorus olitorius HOM05D001304 ORTHO05D007800 2.3e-79 299.7 290 57.2
Sopen09g007800 Solanum pennellii HOM05D001304 ORTHO05D007800 3.0e-79 299.3 283 55.8
unitig_747.g21137 Utricularia gibba HOM05D001304 ORTHO05D007800 1.9e-78 296.6 274 59.5
arahy.Tifrunner.gnm1.ann1.D3J7CW Arachis hypogaea HOM05D001304 ORTHO05D007800 3.3e-78 295.8 291 56.0
Sed0013965 Sechium edule HOM05D001304 ORTHO05D007800 5.6e-78 295.0 294 56.5
PSO063G3228 Papaver somniferum HOM05D001304 ORTHO05D007800 9.5e-78 294.3 301 53.8
arahy.Tifrunner.gnm1.ann1.J2BJ93 Arachis hypogaea HOM05D001304 ORTHO05D007800 1.2e-77 293.9 291 55.3
Haze_12334 Corylus avellana HOM05D001304 ORTHO05D007800 1.8e-76 290.0 245 64.5
Lj6g0014976 Lotus japonicus HOM05D001304 ORTHO05D007800 1.5e-75 287.0 290 53.8
GSVIVG01010319001 Vitis vinifera HOM05D001304 ORTHO05D007800 5.4e-73 278.5 283 55.1
ATR0824G247 Amborella trichopoda HOM05D001304 ORTHO05D007800 7.1e-73 278.1 283 54.1
Actinidia30684 Actinidia chinensis HOM05D001304 ORTHO05D007800 3.9e-71 272.3 199 73.4
Atru.BG.281.p Acer truncatum HOM05D001304 ORTHO05D007800 1.5e-70 270.4 233 63.9
Ah.03g133760 Amaranthus hybridus HOM05D001304 ORTHO05D007800 5.6e-70 268.5 284 53.9
THA.LOC104825527 Tarenaya hassleriana HOM05D001304 ORTHO05D007800 3.6e-69 265.8 288 51.0
BcaB03g15176 Brassica carinata HOM05D001304 ORTHO05D007800 1.9e-65 253.4 286 50.7
CARHR060280 Cardamine hirsuta HOM05D001304 ORTHO05D007800 1.6e-64 250.4 283 49.1
AUR62024175 Chenopodium quinoa HOM05D001304 ORTHO05D007800 3.5e-64 249.2 276 51.8
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 6.0e-64 248.4 275 50.9
BraA07t31049Z Brassica rapa HOM05D001304 ORTHO05D007800 6.0e-64 248.4 286 50.0
Hund25432 Selenicereus undatus HOM05D001304 ORTHO05D007800 7.8e-64 248.1 299 49.2
Os01g0902200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D007800 1.7e-63 246.9 285 47.7
C06p38530 Brassica napus HOM05D001304 ORTHO05D007800 2.3e-63 246.5 279 49.8
Thhalv10018203m.g Eutrema salsugineum HOM05D001304 ORTHO05D007800 2.3e-63 246.5 280 49.6
BcaC08g46186 Brassica carinata HOM05D001304 ORTHO05D007800 3.9e-63 245.7 275 50.5
Carub.0002s1412 Capsella rubella HOM05D001304 ORTHO05D007800 3.9e-63 245.7 279 50.5
BcaB03g15369 Brassica carinata HOM05D001304 ORTHO05D007800 5.1e-63 245.4 278 50.0
Sp5g22680 Schrenkiella parvula HOM05D001304 ORTHO05D007800 5.1e-63 245.4 285 49.5
AT1G67690 Arabidopsis thaliana HOM05D001304 ORTHO05D007800 1.1e-62 244.2 279 49.5
AL2G26390 Arabidopsis lyrata HOM05D001304 ORTHO05D007800 2.5e-62 243.0 278 50.0
AUR62005559 Chenopodium quinoa HOM05D001304 ORTHO05D007800 9.6e-62 241.1 331 45.3
Aa31LG11G12080 Aethionema arabicum HOM05D001304 ORTHO05D007800 8.1e-61 238.0 280 48.9
A07p34200 Brassica napus HOM05D001304 ORTHO05D007800 6.9e-60 235.0 314 45.9
BraA07t30870Z Brassica rapa HOM05D001304 ORTHO05D007800 1.2e-59 234.2 314 44.6
A07p32460 Brassica napus HOM05D001304 ORTHO05D007800 3.4e-59 232.6 280 48.2
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 9.9e-59 231.1 302 46.0
BolC6t38946H Brassica oleracea HOM05D001304 ORTHO05D007800 9.9e-59 231.1 317 43.8
vmacro01092 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 6.2e-53 211.8 197 61.4
EL10Ac6g13421 Beta vulgaris HOM05D001304 ORTHO05D007800 1.1e-52 211.1 353 41.4
Nitab4.5_0000139g0030 Nicotiana tabacum HOM05D001304 ORTHO05D007800 2.4e-52 209.9 199 56.3
Sc11g0000750 Simmondsia chinensis HOM05D001304 ORTHO05D007800 9.9e-51 204.5 194 58.8
Pp3c19_17580 Physcomitrium patens HOM05D001304 ORTHO05D007800 3.5e-48 196.1 279 42.3
Mapoly0080s0066 Marchantia polymorpha HOM05D001304 ORTHO05D007800 3.0e-47 193.0 292 40.4
FAN22G1988 Fragaria x ananassa HOM05D001304 ORTHO05D007800 5.1e-47 192.2 167 62.9
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 8.7e-47 191.4 284 40.5
CDE09G0141 Ceratophyllum demersum HOM05D001304 ORTHO05D007800 1.2e-43 181.0 201 50.2
vmacro01093 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 4.5e-43 179.1 148 66.2
Pp3c18_20030 Physcomitrium patens HOM05D001304 ORTHO05D007800 1.9e-38 163.7 282 35.5
MD16G1110100 Malus domestica HOM05D001304 ORTHO05D007800 7.9e-32 141.7 104 73.1
Cpa.g.sc86.3 Carica papaya HOM05D001304 ORTHO05D007800 1.4e-28 131.0 171 47.4
Glyma.11G247133 Glycine max HOM05D001304 ORTHO05D007800 1.8e-28 130.6 96 64.6
MD16G1110200 Malus domestica HOM05D001304 ORTHO05D007800 6.9e-28 128.6 92 71.7
CAN.G1220.1 Capsicum annuum HOM05D001304 ORTHO05D007800 2.6e-27 126.7 145 46.2
SMO364G0683 Selaginella moellendorffii HOM05D001304 ORTHO05D007800 2.2e-21 107.1 181 37.0
Zm00001eb144370 Zea mays HOM05D001304 ORTHO05D007800 3.8e-18 96.3 96 53.1
C06p27360 Brassica napus HOM05D001304 ORTHO05D040989 3.0e-15 86.7 93 48.4
BolC6t37906H Brassica oleracea HOM05D001304 ORTHO05D040989 3.0e-15 86.7 93 48.4
Nitab4.5_0002483g0020 Nicotiana tabacum HOM05D001304 ORTHO05D007800 2.2e-13 80.5 57 57.9
MD02G1151800 Malus domestica HOM05D001304 ORTHO05D007800 1.4e-12 77.8 100 48.0
HPP92_008946 Vanilla planifolia HOM05D001304 ORTHO05D007800 1.6e-08 64.3 65 53.8
SEGI_20923 Sequoiadendron giganteum HOM05D001304 ORTHO05D007800 4.0e-07 59.7 56 55.4
Cfa024759 Carpinus fangiana HOM05D001304 ORTHO05D007800 7.5e-06 55.5 243 21.0


User provided reference genes

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