Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009051 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 4.0e-50 201.1 96 100.0
CSS0003889 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 4.0e-10 68.2 31 100.0
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 4.0e-10 68.2 31 100.0
CSS0025466 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 6.8e-10 67.4 33 93.9
CSS0035999 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 6.8e-10 67.4 33 93.9
vmacro01304 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 4.4e-09 64.7 58 55.2
vmacro07837 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.7e-08 62.8 56 55.4
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 1.4e-07 59.7 31 80.6
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 1.9e-07 59.3 31 83.9
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 1.9e-07 59.3 33 81.8
vmacro07836 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.9e-07 59.3 31 83.9
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 2.4e-07 58.9 31 80.6
MBI19_g35693_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 3.2e-07 58.5 31 80.6
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 7.1e-07 57.4 31 74.2
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 7.1e-07 57.4 31 83.9
Dinv39616 Davidia involucrata HOM05D000610 ORTHO05D004774 9.3e-07 57.0 31 83.9
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 9.3e-07 57.0 31 80.6
VMungo1383G2829 Vigna mungo HOM05D000610 ORTHO05D004774 9.3e-07 57.0 32 75.0
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.2e-06 56.6 31 74.2
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 1.2e-06 56.6 31 77.4
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 1.6e-06 56.2 31 74.2
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 2.1e-06 55.8 31 74.2
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 2.1e-06 55.8 31 71.0
TAR636G1590 Trochodendron aralioides HOM05D000610 ORTHO05D004774 2.1e-06 55.8 31 77.4
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 2.7e-06 55.5 31 77.4
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 2.7e-06 55.5 31 74.2
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 2.7e-06 55.5 31 74.2
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 2.7e-06 55.5 31 71.0
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 3.5e-06 55.1 31 71.0
Haze_19838 Corylus avellana HOM05D000610 ORTHO05D004774 3.5e-06 55.1 31 71.0
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 3.5e-06 55.1 31 77.4
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 3.5e-06 55.1 31 74.2
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 4.6e-06 54.7 31 74.2
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 4.6e-06 54.7 31 74.2
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 4.6e-06 54.7 31 74.2
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 4.6e-06 54.7 31 74.2
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 4.6e-06 54.7 30 76.7
TAR633G1531 Trochodendron aralioides HOM05D000610 ORTHO05D004774 4.6e-06 54.7 31 74.2
Hma1.2p1_1280F.1_g272560 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 7.8e-06 53.9 30 76.7


User provided reference genes

Program Settings