Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.2e-59 233.0 118 100.0
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.5e-54 216.1 114 94.7
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.3e-54 214.9 114 93.9
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.7e-50 201.4 118 89.0
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 1.2e-48 196.4 114 82.5
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 3.5e-48 194.9 114 84.2
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 3.5e-48 194.9 114 81.6
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 3.5e-48 194.9 114 83.3
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 6.0e-48 194.1 114 83.3
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 6.0e-48 194.1 114 82.5
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 1.7e-47 192.6 114 80.7
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 1.7e-47 192.6 114 80.7
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.7e-47 192.6 114 83.3
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 81.6
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 79.8
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-47 192.2 114 80.7
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 3.9e-47 191.4 116 80.2
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 3.9e-47 191.4 114 80.7
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 5.0e-47 191.0 114 78.9
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.6e-47 190.7 111 82.9
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 8.6e-47 190.3 114 81.6
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 8.6e-47 190.3 114 80.7
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.5e-46 189.5 114 80.7
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.9e-46 189.1 114 80.7
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 1.9e-46 189.1 114 80.7
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 2.5e-46 188.7 114 80.7
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 3.3e-46 188.3 114 78.9
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 3.3e-46 188.3 114 81.6
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 4.3e-46 188.0 114 79.8
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 7.3e-46 187.2 114 80.7
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 3.6e-45 184.9 114 77.2
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 3.6e-45 184.9 114 78.9
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 3.6e-45 184.9 114 78.1
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 3.6e-45 184.9 114 78.9
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 4.7e-45 184.5 114 78.9
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 6.2e-45 184.1 114 78.1
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 8.1e-45 183.7 114 77.2
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 1.1e-44 183.3 114 78.1
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.8e-44 182.6 114 77.2
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.8e-44 182.6 114 77.2
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.8e-44 182.6 116 76.7
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 1.8e-44 182.6 114 77.2
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 1.8e-44 182.6 106 84.9
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.3e-44 182.2 114 77.2
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 3.1e-44 181.8 114 77.2
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.1e-44 181.8 114 77.2
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 4.0e-44 181.4 113 77.0
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 5.2e-44 181.0 114 78.1
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 6.8e-44 180.6 114 77.2
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 8.9e-44 180.3 114 73.7
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 8.9e-44 180.3 113 74.3
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 1.2e-43 179.9 114 75.4
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.2e-43 179.9 114 76.3
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 1.5e-43 179.5 112 75.9
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 2.6e-43 178.7 114 75.4
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 2.6e-43 178.7 106 82.1
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 2.6e-43 178.7 114 74.6
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 2.6e-43 178.7 114 72.8
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.4e-43 178.3 105 83.8
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 3.4e-43 178.3 105 83.8
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 3.4e-43 178.3 113 76.1
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 3.4e-43 178.3 114 76.3
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 4.4e-43 177.9 112 75.9
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 7.5e-43 177.2 113 75.2
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 9.8e-43 176.8 112 74.1
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 9.8e-43 176.8 112 74.1
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 1.3e-42 176.4 114 76.3
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.2e-42 175.6 114 75.4
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 4.9e-42 174.5 114 72.8
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 1.4e-41 172.9 114 72.8
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.4e-41 172.9 114 71.9
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.9e-41 172.6 114 72.8
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.9e-41 172.6 114 72.8
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.9e-41 172.6 114 72.8
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 2.4e-41 172.2 114 72.8
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.4e-41 172.2 114 72.8
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.4e-41 172.2 114 72.8
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.2e-41 171.8 114 71.9
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 3.2e-41 171.8 114 72.8
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 4.1e-41 171.4 114 72.8
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 4.1e-41 171.4 114 76.3
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 5.4e-41 171.0 114 71.9
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 5.4e-41 171.0 114 71.9
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 5.4e-41 171.0 114 71.9
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 5.4e-41 171.0 114 71.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 5.4e-41 171.0 114 73.7
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 7.1e-41 170.6 114 69.3
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 7.1e-41 170.6 114 69.3
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 7.1e-41 170.6 114 71.1
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 9.2e-41 170.2 114 72.8
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 9.2e-41 170.2 113 71.7
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.2e-40 169.9 114 71.1
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.6e-40 169.5 114 71.9
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.6e-40 169.5 114 71.9
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.6e-40 169.5 114 72.8
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.6e-40 169.5 114 71.1
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 2.1e-40 169.1 114 71.1
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 2.1e-40 169.1 114 71.9
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 2.1e-40 169.1 114 71.1
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 2.7e-40 168.7 114 71.9
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 2.7e-40 168.7 112 72.3
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.7e-40 168.7 106 74.5
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 4.6e-40 167.9 114 70.2
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 4.6e-40 167.9 104 79.8
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 6.0e-40 167.5 114 69.3
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 1.0e-39 166.8 114 70.2
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 1.0e-39 166.8 116 69.8
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 1.7e-39 166.0 106 73.6
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 2.3e-39 165.6 114 68.4
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 2.3e-39 165.6 105 78.1
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 3.9e-39 164.9 113 69.0
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 2.5e-38 162.2 114 68.4
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 4.3e-38 161.4 105 76.2
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 5.6e-38 161.0 113 69.9
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 9.5e-38 160.2 155 55.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 1.6e-37 159.5 116 68.1
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.8e-37 158.7 106 71.7
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.4e-36 156.4 113 65.5
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.4e-36 156.4 113 65.5
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 1.8e-36 156.0 116 67.2
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 2.3e-36 155.6 115 71.3
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 3.1e-36 155.2 115 71.3
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 4.0e-36 154.8 114 64.9
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.0e-36 154.8 101 75.2
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 8.9e-36 153.7 116 65.5
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 4.4e-35 151.4 101 71.3
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 4.4e-35 151.4 100 74.0
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 9.9e-35 150.2 103 71.8
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 1.3e-34 149.8 100 73.0
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 3.8e-34 148.3 102 75.5
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 4.9e-34 147.9 114 64.9
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 8.4e-34 147.1 114 65.8
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 2.4e-33 145.6 102 75.5
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 1.0e-31 140.2 133 54.9
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 6.6e-31 137.5 113 59.3
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 2.8e-29 132.1 113 57.5
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 4.4e-27 124.8 81 79.0
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 7.6e-27 124.0 72 86.1
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 1.1e-25 120.2 271 33.2
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 8.7e-23 110.5 72 72.2
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 3.6e-21 105.1 124 42.7
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.4e-20 103.2 70 68.6
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 5.4e-17 91.3 70 62.9
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 2.6e-11 72.4 45 75.6
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.3e-10 70.1 41 80.5
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 9.3e-09 63.9 36 83.3
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 7.9e-08 60.8 33 84.8
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 3.3e-06 55.5 48 66.7


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