Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008993 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 2.7e-58 228.4 110 100.0
CSS0007190 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 5.7e-53 210.7 110 91.8
CSS0033904 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.4e-51 206.1 110 91.8
CSS0048741 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 5.8e-45 184.1 101 89.1
CSS0046742 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 7.5e-45 183.7 110 82.7
CSS0038232 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 2.2e-44 182.2 109 80.7
CSS0044750 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 2.9e-44 181.8 96 88.5
Dinv34774 Davidia involucrata HOM05D000690 ORTHO05D001022 4.4e-21 104.8 101 59.4
Dinv32913 Davidia involucrata HOM05D000690 ORTHO05D001022 1.2e-18 96.7 106 53.8
Actinidia24907 Actinidia chinensis HOM05D000690 ORTHO05D001022 9.6e-16 87.0 98 53.1
Rhsim01G0273400 Rhododendron simsii HOM05D000690 ORTHO05D001022 2.8e-15 85.5 113 46.9
TAR365G1196 Trochodendron aralioides HOM05D000690 ORTHO05D001022 4.7e-15 84.7 90 52.2
Hma1.2p1_0667F.1_g199720 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 4.0e-14 81.6 101 48.5
Actinidia00779 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.2e-13 80.1 83 54.2
QL12p021077 Quercus lobata HOM05D000690 ORTHO05D001022 1.5e-13 79.7 106 49.1
Duzib138G1276 Durio zibethinus HOM05D000690 ORTHO05D001022 1.3e-12 76.6 107 48.6
CiPaw.07G089900 Carya illinoinensis HOM05D000690 ORTHO05D001022 2.9e-12 75.5 105 43.8
Nn6g34094 Nelumbo nucifera HOM05D000690 ORTHO05D001022 2.9e-12 75.5 103 43.7
Cfa006164 Carpinus fangiana HOM05D000690 ORTHO05D001022 4.9e-12 74.7 103 44.7
Haze_04686 Corylus avellana HOM05D000690 ORTHO05D001022 1.1e-11 73.6 104 46.2
Lju41C26G6 Lonicera japonica HOM05D000690 ORTHO05D001022 1.1e-11 73.6 92 50.0
Thecc.01G275400 Theobroma cacao HOM05D000690 ORTHO05D001022 1.1e-11 73.6 108 46.3
TAR633G0554 Trochodendron aralioides HOM05D000690 ORTHO05D001022 1.1e-11 73.6 92 44.6
Duzib211G0670 Durio zibethinus HOM05D000690 ORTHO05D001022 1.4e-11 73.2 107 46.7
MSTRG.21547 Avicennia marina HOM05D000690 ORTHO05D001022 2.4e-11 72.4 103 44.7
Prupe.8G238300 Prunus persica HOM05D000690 ORTHO05D001022 2.4e-11 72.4 105 44.8
RcHm_v2.0_Chr6g0290641 Rosa chinensis HOM05D000690 ORTHO05D001022 3.2e-11 72.0 108 47.2
GSVIVG01001173001 Vitis vinifera HOM05D000690 ORTHO05D001022 3.2e-11 72.0 104 45.2
MSTRG.17455 Avicennia marina HOM05D000690 ORTHO05D001022 6.0e-10 67.8 105 41.9
TAR362G0245 Trochodendron aralioides HOM05D000690 ORTHO05D001022 6.0e-10 67.8 103 42.7
Nn1g06216 Nelumbo nucifera HOM05D000690 ORTHO05D001022 7.8e-10 67.4 103 42.7
Sabra05G0161600 Salix brachista HOM05D000690 ORTHO05D001022 7.8e-10 67.4 105 39.0
Duzib133G1531 Durio zibethinus HOM05D000690 ORTHO05D001022 1.0e-09 67.0 110 43.6
Hund09504 Selenicereus undatus HOM05D000690 ORTHO05D001022 1.0e-09 67.0 105 41.9
FvH4_2g23270 Fragaria vesca HOM05D000690 ORTHO05D001022 1.3e-09 66.6 108 46.3
Prupe.1G016000 Prunus persica HOM05D000690 ORTHO05D001022 1.3e-09 66.6 91 42.9
MSTRG.18247 Avicennia marina HOM05D000690 ORTHO05D001022 1.7e-09 66.2 105 43.8
CSS0047845 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 2.3e-09 65.9 48 68.8
Gorai.007G138400 Gossypium raimondii HOM05D000690 ORTHO05D001022 2.3e-09 65.9 107 44.9
Nn1g02358 Nelumbo nucifera HOM05D000690 ORTHO05D001022 2.3e-09 65.9 103 41.7
FAN15G2082 Fragaria x ananassa HOM05D000690 ORTHO05D001022 3.0e-09 65.5 108 46.3
FAN20G1467 Fragaria x ananassa HOM05D000690 ORTHO05D001022 3.0e-09 65.5 108 45.4
Gohir.D11G129400 Gossypium hirsutum HOM05D000690 ORTHO05D001022 3.0e-09 65.5 107 44.9
Hund27938 Selenicereus undatus HOM05D000690 ORTHO05D001022 3.0e-09 65.5 108 41.7
Manes.01G206000 Manihot esculenta HOM05D000690 ORTHO05D001022 3.9e-09 65.1 105 40.0
PSO761G0687 Papaver somniferum HOM05D000690 ORTHO05D001022 3.9e-09 65.1 96 43.8
Sabra02G0041500 Salix brachista HOM05D000690 ORTHO05D001022 5.1e-09 64.7 105 41.0
Hund02827 Selenicereus undatus HOM05D000690 ORTHO05D001022 5.1e-09 64.7 108 40.7
FAN24G1198 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.6e-09 64.3 108 45.4
FAN27G0350 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.6e-09 64.3 108 45.4
Dinv14007 Davidia involucrata HOM05D000690 ORTHO05D001022 8.7e-09 63.9 95 40.0
SalBow6G0182 Salvia bowleyana HOM05D000690 ORTHO05D001022 1.9e-08 62.8 80 50.0
Gohir.A11G124200 Gossypium hirsutum HOM05D000690 ORTHO05D001022 2.5e-08 62.4 107 43.0
Potri.002G050800 Populus trichocarpa HOM05D000690 ORTHO05D001022 2.5e-08 62.4 106 40.6
PSO210G6390 Papaver somniferum HOM05D000690 ORTHO05D001022 5.6e-08 61.2 97 44.3
Rhsim02G0026200 Rhododendron simsii HOM05D000690 ORTHO05D001022 1.3e-07 60.1 92 42.4
Cfa011182 Carpinus fangiana HOM05D000690 ORTHO05D001022 1.6e-07 59.7 102 40.2
Cpa.g.sc487.5 Carica papaya HOM05D000690 ORTHO05D001022 2.1e-07 59.3 103 41.7
Haze_00880 Corylus avellana HOM05D000690 ORTHO05D001022 2.1e-07 59.3 102 40.2
Potri.005G211500 Populus trichocarpa HOM05D000690 ORTHO05D001022 2.8e-07 58.9 105 35.2
Actinidia36952 Actinidia chinensis HOM05D000690 ORTHO05D001022 3.6e-07 58.5 87 41.4
Gohir.D08G073900 Gossypium hirsutum HOM05D000690 ORTHO05D001022 3.6e-07 58.5 112 38.4
Gorai.012G060900 Gossypium raimondii HOM05D000690 ORTHO05D022135 4.8e-07 58.2 74 51.4
PGR044G0450 Punica granatum HOM05D000690 ORTHO05D001022 6.2e-07 57.8 102 40.2
Gohir.A08G065400 Gossypium hirsutum HOM05D000690 ORTHO05D001022 8.1e-07 57.4 113 38.1
Gorai.004G078300 Gossypium raimondii HOM05D000690 ORTHO05D001022 1.1e-06 57.0 112 37.5
Manes.03G176900 Manihot esculenta HOM05D000690 ORTHO05D001022 1.1e-06 57.0 101 40.6
SalBow4G1715 Salvia bowleyana HOM05D000690 ORTHO05D001022 1.1e-06 57.0 74 45.9
COL.COLO4_09065 Corchorus olitorius HOM05D000690 ORTHO05D001022 1.8e-06 56.2 111 41.4
Hma1.2p1_0822F.1_g224320 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 3.1e-06 55.5 94 41.5
vmacro15352 Vaccinium macrocarpon HOM05D000690 ORTHO05D001022 3.1e-06 55.5 119 37.0
Rhsim04G0201300 Rhododendron simsii HOM05D000690 ORTHO05D001022 4.0e-06 55.1 85 41.2
Aqoxy5G00446 Aquilegia oxysepala HOM05D000690 ORTHO05D001022 5.3e-06 54.7 109 38.5
PGSC0003DMG400032251 Solanum tuberosum HOM05D000690 ORTHO05D001022 6.9e-06 54.3 87 41.4
RcHm_v2.0_Chr4g0415801 Rosa chinensis HOM05D000690 ORTHO05D001022 9.0e-06 53.9 91 39.6


User provided reference genes

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