Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008988 Camellia sinensis var. sinensis HOM05D000080 ORTHO05D109305 7.1e-28 126.3 55 100.0
Actinidia15625 Actinidia chinensis HOM05D000080 ORTHO05D000053 1.4e-07 58.9 30 76.7
Lalb_Chr01g0009881 Lupinus albus HOM05D000080 ORTHO05D000053 1.4e-07 58.9 30 80.0
TPR.G40106 Trifolium pratense HOM05D000080 ORTHO05D000053 1.4e-07 58.9 30 83.3
RcHm_v2.0_Chr3g0473931 Rosa chinensis HOM05D000080 ORTHO05D000053 1.8e-07 58.5 30 80.0
TPR.G40107 Trifolium pratense HOM05D000080 ORTHO05D000053 2.4e-07 58.2 30 83.3
Medtr3g101635 Medicago truncatula HOM05D000080 ORTHO05D000053 3.1e-07 57.8 30 83.3
Lj5g0019648 Lotus japonicus HOM05D000080 ORTHO05D000053 5.3e-07 57.0 30 80.0
Rhsim07G0046000 Rhododendron simsii HOM05D000080 ORTHO05D000053 5.3e-07 57.0 30 73.3
CANSAT25G1206 Cannabis sativa HOM05D000080 ORTHO05D000053 6.9e-07 56.6 30 76.7
FAN15G3382 Fragaria x ananassa HOM05D000080 ORTHO05D000053 6.9e-07 56.6 29 75.9
FAN20G2532 Fragaria x ananassa HOM05D000080 ORTHO05D000053 6.9e-07 56.6 29 75.9
GSVIVG01012343001 Vitis vinifera HOM05D000080 ORTHO05D000053 6.9e-07 56.6 30 80.0
Haze_17856 Corylus avellana HOM05D000080 ORTHO05D000053 9.0e-07 56.2 29 75.9
Rhsim06G0087900 Rhododendron simsii HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 76.7
THA.LOC104800224 Tarenaya hassleriana HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01012746001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01034820001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01034822001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01034823001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01034828001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
GSVIVG01034842001 Vitis vinifera HOM05D000080 ORTHO05D000053 9.0e-07 56.2 30 80.0
TPR.G28117 Trifolium pratense HOM05D000080 ORTHO05D000053 1.2e-06 55.8 30 76.7
GSVIVG01012346001 Vitis vinifera HOM05D000080 ORTHO05D000053 1.2e-06 55.8 30 80.0
Hma1.2p1_0276F.1_g111170 Hydrangea macrophylla HOM05D000080 ORTHO05D000053 1.5e-06 55.5 30 76.7
TWI32G0079 Tripterygium wilfordii HOM05D000080 ORTHO05D000053 1.5e-06 55.5 30 73.3
GSVIVG01012745001 Vitis vinifera HOM05D000080 ORTHO05D000053 1.5e-06 55.5 30 76.7
FvH4_2g05800 Fragaria vesca HOM05D000080 ORTHO05D000053 2.6e-06 54.7 29 72.4
MSTRG.24942 Avicennia marina HOM05D000080 ORTHO05D000053 3.4e-06 54.3 30 76.7
RcHm_v2.0_Chr3g0473941 Rosa chinensis HOM05D000080 ORTHO05D000053 3.4e-06 54.3 30 76.7
Actinidia10281 Actinidia chinensis HOM05D000080 ORTHO05D000053 4.5e-06 53.9 30 76.7
Dinv13080 Davidia involucrata HOM05D000080 ORTHO05D000053 4.5e-06 53.9 29 72.4
ECA247G2963 Erigeron canadensis HOM05D000080 ORTHO05D000053 4.5e-06 53.9 30 76.7
TAR628G1144 Trochodendron aralioides HOM05D000080 ORTHO05D000053 4.5e-06 53.9 30 73.3
GSVIVG01012359001 Vitis vinifera HOM05D000080 ORTHO05D000053 5.9e-06 53.5 30 73.3
Cfa018242 Carpinus fangiana HOM05D000080 ORTHO05D000053 7.7e-06 53.1 29 72.4
Glyma.20G172700 Glycine max HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 76.7
HanXRQChr05g0162151 Helianthus annuus HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 76.7
Phvul.007G086500 Phaseolus vulgaris HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 76.7
Psat5g042960 Pisum sativum HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 76.7
Potri.005G200600 Populus trichocarpa HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 70.0
Potri.011G071100 Populus trichocarpa HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 70.0
RcHm_v2.0_Chr6g0257941 Rosa chinensis HOM05D000080 ORTHO05D000053 7.7e-06 53.1 30 73.3
TWI32G0571 Tripterygium wilfordii HOM05D000080 ORTHO05D000053 7.7e-06 53.1 29 72.4
Actinidia10282 Actinidia chinensis HOM05D000080 ORTHO05D000053 1.0e-05 52.8 30 70.0
Glyma.10G219100 Glycine max HOM05D000080 ORTHO05D000053 1.0e-05 52.8 31 74.2
Potri.005G200500 Populus trichocarpa HOM05D000080 ORTHO05D000053 1.0e-05 52.8 30 70.0
RcHm_v2.0_Chr2g0120971 Rosa chinensis HOM05D000080 ORTHO05D000053 1.0e-05 52.8 30 73.3
RcHm_v2.0_Chr2g0121051 Rosa chinensis HOM05D000080 ORTHO05D000053 1.0e-05 52.8 30 73.3
RcHm_v2.0_Chr2g0121211 Rosa chinensis HOM05D000080 ORTHO05D000053 1.0e-05 52.8 30 73.3


User provided reference genes

Program Settings