Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 2.8e-160 568.5 281 100.0
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 3.1e-103 379.0 236 75.0
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 4.6e-99 365.2 229 75.5
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 5.1e-98 361.7 229 72.5
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 2.0e-97 359.8 233 70.4
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 5.7e-97 358.2 232 71.6
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 1.1e-95 354.0 233 68.7
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 3.1e-95 352.4 238 69.7
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 1.5e-94 350.1 231 68.0
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 7.7e-94 347.8 234 68.4
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 3.8e-93 345.5 238 68.5
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 5.0e-93 345.1 232 68.5
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 2.5e-92 342.8 238 66.0
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 2.5e-92 342.8 233 68.7
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 4.2e-92 342.0 264 59.5
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 7.2e-92 341.3 229 68.6
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.2e-91 340.5 238 64.7
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 1.2e-91 340.5 237 69.2
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.4e-90 337.0 238 63.0
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 1.1e-89 334.0 234 64.5
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 1.1e-89 334.0 234 64.5
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 2.6e-89 332.8 231 67.5
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 3.3e-89 332.4 234 66.2
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 7.4e-89 331.3 234 64.5
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 7.4e-89 331.3 236 62.7
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.7e-88 330.1 229 64.2
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 1.7e-88 330.1 233 67.0
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 4.8e-88 328.6 233 66.5
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 1.8e-87 326.6 233 66.1
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 5.3e-87 325.1 233 63.5
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 9.1e-87 324.3 238 60.5
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 9.1e-87 324.3 229 62.9
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.2e-86 323.9 234 63.7
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 1.2e-86 323.9 239 63.2
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 1.6e-86 323.6 234 62.0
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 3.5e-86 322.4 236 61.4
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 4.5e-86 322.0 231 62.8
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 1.0e-85 320.9 234 62.8
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 1.3e-85 320.5 236 60.6
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 3.8e-85 318.9 239 61.5
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 3.8e-85 318.9 236 61.4
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 5.0e-85 318.5 233 60.9
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 8.5e-85 317.8 236 61.4
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 5.5e-84 315.1 234 62.4
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 2.7e-83 312.8 239 59.4
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 8.0e-83 311.2 220 66.4
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.0e-82 310.8 234 60.7
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 1.0e-82 310.8 236 59.3
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 1.4e-82 310.5 236 59.7
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 3.3e-81 305.8 258 57.0
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 1.3e-80 303.9 229 63.3
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.7e-80 303.5 229 63.3
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 3.7e-80 302.4 233 54.5
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 6.3e-80 301.6 236 58.5
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 6.3e-80 301.6 228 61.0
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 8.2e-80 301.2 229 62.9
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 1.8e-79 300.1 234 60.3
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 3.1e-79 299.3 231 60.2
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 4.1e-79 298.9 234 59.8
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 4.1e-79 298.9 234 59.4
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 4.1e-79 298.9 234 59.4
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 2.9e-77 292.7 231 57.1
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 1.2e-75 287.3 233 59.2
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.6e-75 287.0 212 62.3
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 2.1e-75 286.6 233 56.2
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 2.1e-75 286.6 252 54.8
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 4.7e-75 285.4 232 57.3
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 1.8e-74 283.5 218 58.7
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 3.0e-74 282.7 229 58.1
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 8.8e-74 281.2 233 57.1
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 1.2e-73 280.8 241 55.6
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.5e-73 280.4 231 55.4
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.5e-73 280.4 194 68.6
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 2.0e-73 280.0 233 54.9
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 4.4e-73 278.9 230 55.7
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 1.3e-72 277.3 177 74.0
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 1.1e-71 274.2 231 59.3
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 4.1e-71 272.3 196 65.3
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 1.2e-70 270.8 246 52.4
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 5.9e-70 268.5 169 74.6
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.3e-69 267.3 210 60.0
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 2.3e-69 266.5 235 52.3
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 8.6e-69 264.6 233 51.9
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 8.6e-69 264.6 235 51.5
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 4.2e-68 262.3 235 50.6
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 5.5e-68 261.9 235 51.1
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 7.2e-68 261.5 229 54.1
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 1.6e-67 260.4 233 51.5
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 3.6e-67 259.2 258 50.0
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 6.1e-67 258.5 235 50.6
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 6.1e-67 258.5 235 50.6
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 1.4e-66 257.3 223 54.7
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 3.0e-66 256.1 226 55.8
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 4.0e-66 255.8 235 50.6
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 4.0e-66 255.8 235 51.1
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 6.8e-66 255.0 231 51.1
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 8.9e-66 254.6 235 49.8
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 2.0e-65 253.4 234 53.8
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 4.4e-65 252.3 229 53.3
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 4.4e-65 252.3 231 53.2
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 2.2e-64 250.0 180 61.7
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 8.3e-64 248.1 234 50.0
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 2.4e-63 246.5 239 50.2
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 7.0e-63 245.0 169 66.3
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 2.7e-62 243.0 226 53.1
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 4.5e-62 242.3 178 61.8
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 2.5e-60 236.5 179 59.2
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 3.3e-60 236.1 228 49.1
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 7.3e-60 235.0 223 50.7
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.2e-59 234.2 218 54.1
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 3.6e-59 232.6 230 51.7
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 5.7e-57 225.3 256 46.1
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 1.4e-55 220.7 230 47.4
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 9.2e-55 218.0 234 43.2
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 3.0e-53 213.0 238 43.3
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 5.0e-53 212.2 234 44.4
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 4.4e-49 199.1 143 65.0
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 1.2e-46 191.0 135 62.2
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 8.6e-45 184.9 234 39.7
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 1.1e-44 184.5 263 40.7
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 4.7e-35 152.5 141 51.8
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 8.9e-34 148.3 99 60.6
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 1.2e-33 147.9 95 64.2
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.5e-33 147.5 120 56.7
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 3.8e-32 142.9 95 63.2
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 3.9e-29 132.9 117 54.7
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.5e-28 131.0 108 56.5
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 3.6e-27 126.3 91 65.9
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.1e-26 124.8 85 68.2
AUR62033196 Chenopodium quinoa HOM05D005177 ORTHO05D006175 4.0e-26 122.9 101 54.5
AUR62037383 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.3e-24 117.9 101 50.5
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 1.7e-24 117.5 90 57.8
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.3e-21 107.8 89 60.7
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.6e-19 100.9 104 41.3
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 5.3e-18 95.9 75 58.7
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 9.9e-17 91.7 75 61.3
MD02G1245500 Malus domestica HOM05D005177 ORTHO05D006175 1.9e-07 60.8 41 65.9
Phvul.011G073000 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.6e-06 57.8 43 58.1


User provided reference genes

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