Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.0e-190 667.2 344 100.0
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 5.6e-171 604.4 342 88.9
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.8e-145 519.6 343 77.8
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.2e-142 508.4 344 74.7
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.9e-135 485.7 388 68.3
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.7e-133 479.2 342 71.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 4.5e-128 461.8 343 69.4
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.1e-126 457.2 347 68.0
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.9e-126 456.4 345 67.8
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.6e-125 453.4 344 67.7
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 4.6e-125 451.8 344 67.7
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 6.0e-125 451.4 344 69.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.9e-125 451.1 342 68.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.3e-124 450.3 344 67.2
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 3.0e-124 449.1 345 69.0
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.9e-124 448.7 344 67.2
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 6.7e-124 448.0 343 68.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 8.7e-124 447.6 346 68.8
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.1e-123 447.2 342 68.4
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.1e-123 447.2 342 68.4
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.5e-123 446.8 259 83.0
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.3e-123 445.7 342 69.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.7e-123 444.9 341 69.2
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 9.6e-123 444.1 265 80.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.6e-122 443.4 344 68.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 2.1e-122 443.0 345 67.2
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.1e-122 443.0 343 66.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 8.2e-122 441.0 262 82.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.4e-121 440.3 262 81.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-121 440.3 344 67.2
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.4e-121 440.3 258 82.2
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.8e-121 439.9 345 67.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 3.1e-121 439.1 263 81.0
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 4.1e-121 438.7 259 80.7
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.2e-120 437.2 343 66.2
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.4e-120 435.6 257 81.7
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 3.4e-120 435.6 272 79.4
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 4.5e-120 435.3 262 80.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.8e-120 434.9 343 65.3
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.7e-119 433.3 346 66.8
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 2.9e-119 432.6 344 65.7
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.8e-119 432.2 263 80.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.4e-118 430.3 263 79.1
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 3.2e-118 429.1 346 66.5
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 3.2e-118 429.1 325 67.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.2e-118 429.1 399 60.7
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.2e-117 427.2 267 76.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.9e-117 424.5 262 79.8
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.0e-116 424.1 258 77.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.3e-116 423.7 255 80.0
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 6.7e-116 421.4 343 63.6
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 8.7e-116 421.0 348 63.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 8.7e-116 421.0 257 77.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.5e-115 420.2 345 65.8
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.5e-115 419.5 344 65.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.7e-115 418.3 316 69.0
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.7e-115 418.3 257 76.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 9.7e-115 417.5 263 77.6
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.8e-114 416.0 260 75.4
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.8e-114 415.2 347 62.8
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.8e-114 415.2 258 77.1
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-113 414.1 245 80.4
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.4e-113 413.7 342 62.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.4e-113 413.7 344 62.2
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.8e-113 413.3 275 74.2
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.4e-113 412.9 266 74.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 3.1e-113 412.5 342 62.9
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 4.1e-113 412.1 266 74.1
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.2e-112 410.6 262 74.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.2e-112 410.6 266 73.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.2e-112 410.6 275 73.8
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.5e-112 410.2 262 74.0
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.4e-112 409.1 260 74.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 4.5e-112 408.7 262 74.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 4.5e-112 408.7 262 74.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 2.2e-111 406.4 262 74.0
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 3.8e-111 405.6 263 73.4
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 6.5e-111 404.8 342 61.4
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.9e-110 403.3 259 76.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 4.2e-110 402.1 258 73.6
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 3.6e-109 399.1 368 58.2
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.8e-108 396.7 342 61.1
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 8.8e-108 394.4 259 72.6
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.1e-107 394.0 259 74.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.8e-106 389.4 256 75.4
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.8e-100 370.2 274 66.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.0e-99 366.7 378 52.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.3e-99 365.9 252 67.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 7.4e-99 364.8 239 71.1
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.4e-97 360.5 343 57.4
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.4e-97 360.5 256 72.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-89 334.3 266 67.3
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.1e-89 332.8 262 63.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.1e-85 320.1 263 56.7
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 4.7e-85 318.9 235 62.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.5e-83 313.9 242 59.1
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 3.7e-82 309.3 266 62.0
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 8.3e-82 308.1 298 57.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 6.5e-79 298.5 249 60.2
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.2e-76 288.9 157 82.2
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.7e-75 285.4 238 54.6
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 2.9e-71 273.1 180 72.8
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.9e-70 270.4 256 56.6
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.2e-65 251.5 148 83.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.6e-59 233.4 165 72.1
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 4.6e-56 222.6 134 79.9
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.9e-54 217.2 136 75.7
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 8.9e-52 208.4 244 44.3
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.8e-45 186.8 265 43.4
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.8e-45 186.8 137 61.3
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.6e-43 180.3 97 87.6
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.1e-29 134.0 241 35.3
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.8e-29 133.7 296 30.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.2e-26 124.0 250 33.6
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.1e-20 105.1 116 51.7
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.0e-15 87.0 48 72.9
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.8e-13 79.7 100 44.0


User provided reference genes

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