Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008959 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 7.0e-179 630.9 431 100.0
CSS0028153 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.3e-97 360.1 461 66.6
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.2e-75 286.2 529 53.5
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.7e-44 184.5 702 40.7
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 3.2e-38 163.7 225 61.3
CSS0031678 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.8e-33 147.9 95 80.0
Actinidia02870 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.6e-21 106.7 198 37.4
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.6e-21 106.7 222 46.8
Actinidia23543 Actinidia chinensis HOM05D000311 ORTHO05D000183 5.6e-19 99.8 195 36.4
Actinidia23544 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.8e-17 94.7 68 69.1
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.0e-17 93.6 198 35.4
CiPaw.15G115300 Carya illinoinensis HOM05D000311 ORTHO05D000183 5.8e-16 89.7 464 31.2
Actinidia13166 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.6e-13 80.1 67 52.2
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 4.6e-13 80.1 551 37.6
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 4.6e-13 80.1 551 37.6
Actinidia37307 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.0e-12 79.0 94 46.8
CiPaw.04G177700 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.7e-12 78.2 56 64.3
CiPaw.15G114500 Carya illinoinensis HOM05D000311 ORTHO05D000183 5.1e-12 76.6 62 66.1
Gohir.A08G041900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.5e-11 75.1 183 28.4
CSS0039006 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.5e-11 74.3 65 61.5
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 2.5e-11 74.3 202 26.2
Nitab4.5_0009518g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.5e-11 74.3 87 44.8
CiPaw.15G115400 Carya illinoinensis HOM05D000311 ORTHO05D000183 9.6e-11 72.4 95 47.4
Dinv36446 Davidia involucrata HOM05D000311 ORTHO05D000183 1.2e-10 72.0 198 27.8
QL04p004476 Quercus lobata HOM05D000311 ORTHO05D000183 1.2e-10 72.0 64 54.7
QL04p003704 Quercus lobata HOM05D000311 ORTHO05D000183 2.8e-10 70.9 432 31.5
Duzib212G0961 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-10 69.3 59 49.2
TWI14G0299 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 8.1e-10 69.3 65 56.9
TWI14G0374 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 8.1e-10 69.3 65 56.9
CiPaw.15G114400 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.4e-09 68.6 65 60.0
Gohir.D02G027100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.8e-09 68.2 170 27.6
Duzib212G0987 Durio zibethinus HOM05D000311 ORTHO05D000183 2.4e-09 67.8 114 31.6
Gohir.D02G026400 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.4e-09 67.8 167 27.5
QL04p004370 Quercus lobata HOM05D000311 ORTHO05D000183 2.4e-09 67.8 190 50.0
Duzib212G0774 Durio zibethinus HOM05D000311 ORTHO05D000183 3.1e-09 67.4 59 47.5
Potri.003G013200 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.1e-09 67.4 66 48.5
Potri.005G007600 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.1e-09 67.4 61 49.2
TWI34G1776 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.1e-09 67.4 69 52.2
Actinidia23545 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.0e-09 67.0 53 62.3
Potri.003G026308 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.2e-09 66.6 66 48.5
vmacro21891 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 5.2e-09 66.6 71 47.9
Potri.005G011600 Populus trichocarpa HOM05D000311 ORTHO05D000183 8.9e-09 65.9 66 43.9
Actinidia21924 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.2e-08 65.5 166 52.4
Duzib212G0440 Durio zibethinus HOM05D000311 ORTHO05D000183 1.2e-08 65.5 114 31.6
Oeu034160.1 Olea europaea HOM05D000311 ORTHO05D000183 1.5e-08 65.1 214 41.1
Oeu052518.2 Olea europaea HOM05D000311 ORTHO05D000183 1.5e-08 65.1 64 51.6
Potri.003G013700 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.5e-08 65.1 66 45.5
QL93p2015_0025 Quercus lobata HOM05D000311 ORTHO05D000183 1.5e-08 65.1 179 29.6
Duzib212G0289 Durio zibethinus HOM05D000311 ORTHO05D000183 2.0e-08 64.7 114 32.5
Duzib212G0835 Durio zibethinus HOM05D000311 ORTHO05D000183 2.6e-08 64.3 114 32.5
QL04p003552 Quercus lobata HOM05D000311 ORTHO05D000183 2.6e-08 64.3 224 41.5
QL04p004418 Quercus lobata HOM05D000311 ORTHO05D000183 2.6e-08 64.3 168 51.8
CAN.G222.13 Capsicum annuum HOM05D000311 ORTHO05D000183 3.4e-08 63.9 114 38.6
Potri.003G028557 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.4e-08 63.9 66 45.5
Duzib184G0003 Durio zibethinus HOM05D000311 ORTHO05D000183 4.4e-08 63.5 59 44.1
Duzib212G0464 Durio zibethinus HOM05D000311 ORTHO05D000183 4.4e-08 63.5 59 44.1
Duzib214G0003 Durio zibethinus HOM05D000311 ORTHO05D000183 4.4e-08 63.5 59 44.1
Solyc11g011180.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 4.4e-08 63.5 70 47.1
TWI34G1219 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.4e-08 63.5 65 49.2
CAN.G222.21 Capsicum annuum HOM05D000311 ORTHO05D000183 7.6e-08 62.8 64 50.0
CAN.G222.22 Capsicum annuum HOM05D000311 ORTHO05D000183 7.6e-08 62.8 70 47.1
Sopen11g005940 Solanum pennellii HOM05D000311 ORTHO05D000183 7.6e-08 62.8 70 47.1
Nitab4.5_0009518g0040 Nicotiana tabacum HOM05D000311 ORTHO05D000183 9.9e-08 62.4 82 41.5
Potri.003G026914 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.9e-08 62.4 66 45.5
Duzib184G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 1.7e-07 61.6 371 46.4
Duzib212G0684 Durio zibethinus HOM05D000311 ORTHO05D000183 1.7e-07 61.6 89 34.8
Duzib212G1037 Durio zibethinus HOM05D000311 ORTHO05D000183 1.7e-07 61.6 56 46.4
Duzib214G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 1.7e-07 61.6 371 46.4
TWI34G0490 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.7e-07 61.6 65 49.2
Duzib212G0750 Durio zibethinus HOM05D000311 ORTHO05D000183 2.9e-07 60.8 187 26.2
Gohir.A08G044100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.9e-07 60.8 58 48.3
Nitab4.5_0001621g0050 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.9e-07 60.8 64 50.0
Potri.005G006701 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.9e-07 60.8 375 42.9
Solyc08g016210.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 3.8e-07 60.5 58 48.3
Duzib212G0621 Durio zibethinus HOM05D000311 ORTHO05D000183 4.9e-07 60.1 89 33.7
Gohir.D10G125000 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.9e-07 60.1 61 42.6
Gorai.011G138100 Gossypium raimondii HOM05D000311 ORTHO05D000183 4.9e-07 60.1 61 42.6
Nitab4.5_0010327g0010 Nicotiana tabacum HOM05D000311 ORTHO05D000183 4.9e-07 60.1 64 48.4
Potri.005G013800 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.9e-07 60.1 66 48.5
QL04p003897 Quercus lobata HOM05D000311 ORTHO05D000183 4.9e-07 60.1 224 41.1
Gohir.D08G053700 Gossypium hirsutum HOM05D000311 ORTHO05D000183 6.4e-07 59.7 58 44.8
Gorai.004G053700 Gossypium raimondii HOM05D000311 ORTHO05D000183 6.4e-07 59.7 58 44.8
Peaxi162Scf01205g00183 Petunia axillaris HOM05D000311 ORTHO05D000183 6.4e-07 59.7 60 48.3
Sopen08g006560 Solanum pennellii HOM05D000311 ORTHO05D000183 6.4e-07 59.7 58 48.3
Duzib212G0651 Durio zibethinus HOM05D000311 ORTHO05D000183 8.4e-07 59.3 363 21.2
QL04p004403 Quercus lobata HOM05D000311 ORTHO05D000183 8.4e-07 59.3 168 42.3
Duzib168G2401 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-06 58.9 201 24.4
Potri.018G148000 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.1e-06 58.9 96 40.6
Sopen08g006740 Solanum pennellii HOM05D000311 ORTHO05D000183 1.1e-06 58.9 58 50.0
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 1.1e-06 58.9 50 48.0
Gohir.D08G053800 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.4e-06 58.5 208 26.0
QL04p003852 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-06 58.5 169 50.3
Actinidia38684 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.9e-06 58.2 166 50.6
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 1.9e-06 58.2 175 48.0
Duzib212G0107 Durio zibethinus HOM05D000311 ORTHO05D000183 1.9e-06 58.2 207 44.4
Glyma.07G144100 Glycine max HOM05D000311 ORTHO05D000183 1.9e-06 58.2 63 46.0
Gorai.005G031800 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.9e-06 58.2 61 44.3
PGSC0003DMG400015687 Solanum tuberosum HOM05D000311 ORTHO05D000183 1.9e-06 58.2 117 35.0
CAN.G525.26 Capsicum annuum HOM05D000311 ORTHO05D000183 2.4e-06 57.8 54 50.0
Duzib212G0989 Durio zibethinus HOM05D000311 ORTHO05D000183 2.4e-06 57.8 186 26.3
Eucgr.E04279 Eucalyptus grandis HOM05D000311 ORTHO05D000183 2.4e-06 57.8 72 41.7
Solyc04g014400.4 Solanum lycopersicum HOM05D000311 ORTHO05D000183 2.4e-06 57.8 56 51.8
Gohir.A10G217200 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.2e-06 57.4 199 24.1
QL93p2015_0040 Quercus lobata HOM05D000311 ORTHO05D000183 3.2e-06 57.4 224 42.9
Gohir.D02G026700 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.2e-06 57.0 55 45.5
Gohir.D10G225865 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.2e-06 57.0 63 46.0
Nitab4.5_0000201g0250 Nicotiana tabacum HOM05D000311 ORTHO05D000183 4.2e-06 57.0 67 46.3
Nitab4.5_0000348g0230 Nicotiana tabacum HOM05D000311 ORTHO05D000183 4.2e-06 57.0 55 52.7
Nitab4.5_0007230g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 4.2e-06 57.0 53 52.8
QL04p004538 Quercus lobata HOM05D000311 ORTHO05D000183 4.2e-06 57.0 221 42.5
QL04p004667 Quercus lobata HOM05D000311 ORTHO05D000183 4.2e-06 57.0 221 42.5
COL.COLO4_20182 Corchorus olitorius HOM05D000311 ORTHO05D000183 5.4e-06 56.6 64 45.3
Duzib187G0470 Durio zibethinus HOM05D000311 ORTHO05D000183 5.4e-06 56.6 67 44.8
Duzib212G0734 Durio zibethinus HOM05D000311 ORTHO05D000183 5.4e-06 56.6 108 30.6
Gorai.011G257100 Gossypium raimondii HOM05D000311 ORTHO05D000183 5.4e-06 56.6 270 41.1
Potri.005G008600 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.4e-06 56.6 546 37.7
Sopen04g006530 Solanum pennellii HOM05D000311 ORTHO05D000183 7.1e-06 56.2 171 46.8
Gohir.A05G389900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 9.3e-06 55.8 58 44.8


User provided reference genes

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