Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008957 Camellia sinensis var. sinensis HOM05D005337 ORTHO05D006567 1.4e-180 637.5 786 100.0
Lj2C569T6 Lonicera japonica HOM05D005337 ORTHO05D006567 1.1e-84 318.9 760 80.3
Ciclev10014263m.g Citrus clementina HOM05D005337 ORTHO05D006567 1.5e-83 315.1 800 76.0
MD10G1258300 Malus domestica HOM05D005337 ORTHO05D006567 2.5e-81 307.8 813 76.6
Rhsim09G0050900 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.7e-80 304.3 789 71.1
Dinv21523 Davidia involucrata HOM05D005337 ORTHO05D006567 1.1e-78 298.9 779 80.7
vmacro03433 Vaccinium macrocarpon HOM05D005337 ORTHO05D006567 1.1e-78 298.9 789 78.6
QL05p055125 Quercus lobata HOM05D005337 ORTHO05D006567 5.7e-78 296.6 791 78.4
TWI73G0840 Tripterygium wilfordii HOM05D005337 ORTHO05D006567 1.7e-77 295.0 801 79.0
FvH4_3g05050 Fragaria vesca HOM05D005337 ORTHO05D006567 3.7e-77 293.9 792 76.8
FAN11G3121 Fragaria x ananassa HOM05D005337 ORTHO05D006567 1.1e-76 292.4 792 76.6
TAR624G0614 Trochodendron aralioides HOM05D005337 ORTHO05D006567 1.1e-76 292.4 782 77.1
FAN25G3288 Fragaria x ananassa HOM05D005337 ORTHO05D006567 2.4e-76 291.2 792 76.5
Peaxi162Scf00045g00242 Petunia axillaris HOM05D005337 ORTHO05D006567 6.9e-76 289.7 812 75.9
Prupe.4G085500 Prunus persica HOM05D005337 ORTHO05D006567 6.9e-76 289.7 800 76.1
Gohir.D10G045100 Gossypium hirsutum HOM05D005337 ORTHO05D006567 4.5e-75 287.0 794 78.0
FAN16G3117 Fragaria x ananassa HOM05D005337 ORTHO05D006567 1.1e-73 282.3 778 77.5
Gohir.A10G043900 Gossypium hirsutum HOM05D005337 ORTHO05D006567 1.9e-73 281.6 790 77.8
Nitab4.5_0000315g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 2.7e-72 277.7 671 83.6
Actinidia13442 Actinidia chinensis HOM05D005337 ORTHO05D006567 4.7e-72 276.9 398 67.1
CiPaw.09G119800 Carya illinoinensis HOM05D005337 ORTHO05D006567 6.1e-72 276.6 696 87.6
Nitab4.5_0002071g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 7.9e-72 276.2 811 72.4
Manes.01G172900 Manihot esculenta HOM05D005337 ORTHO05D006567 1.1e-70 272.3 764 72.5
Gorai.011G048000 Gossypium raimondii HOM05D005337 ORTHO05D006567 3.3e-70 270.8 730 82.3
ClCG01G024880 Citrullus lanatus HOM05D005337 ORTHO05D006567 7.4e-70 269.6 804 71.1
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 9.7e-70 269.2 675 83.9
TAR624G0918 Trochodendron aralioides HOM05D005337 ORTHO05D006567 1.3e-69 268.9 419 59.4
Cfa000901 Carpinus fangiana HOM05D005337 ORTHO05D006567 2.8e-69 267.7 696 86.5
GSVIVG01021547001 Vitis vinifera HOM05D005337 ORTHO05D006567 2.8e-69 267.7 776 75.5
MSTRG.7512 Avicennia marina HOM05D005337 ORTHO05D006567 3.7e-69 267.3 770 66.0
DCAR_004624 Daucus carota HOM05D005337 ORTHO05D000307 6.3e-69 266.5 700 81.9
CAN.G36.25 Capsicum annuum HOM05D005337 ORTHO05D006567 1.1e-68 265.8 728 77.3
Eucgr.E02454 Eucalyptus grandis HOM05D005337 ORTHO05D006567 1.1e-68 265.8 723 78.6
Glyma.15G090700 Glycine max HOM05D005337 ORTHO05D006567 2.0e-67 261.5 704 81.8
MELO3C007107.2 Cucumis melo HOM05D005337 ORTHO05D006567 1.3e-66 258.8 802 71.6
Sed0025020 Sechium edule HOM05D005337 ORTHO05D006567 2.2e-66 258.1 786 72.0
Thecc.06G144500 Theobroma cacao HOM05D005337 ORTHO05D006567 3.8e-66 257.3 799 76.5
Psat3g019680 Pisum sativum HOM05D005337 ORTHO05D006567 1.5e-65 255.4 714 82.8
Glyma.13G221600 Glycine max HOM05D005337 ORTHO05D006567 5.5e-65 253.4 762 76.2
Cc11_g05070 Coffea canephora HOM05D005337 ORTHO05D006567 1.6e-64 251.9 797 76.7
CsaV3_6G052010 Cucumis sativus L. HOM05D005337 ORTHO05D006567 1.6e-64 251.9 802 70.8
Lj6g0017822 Lotus japonicus HOM05D005337 ORTHO05D006567 1.6e-64 251.9 739 81.5
PGR035G0002 Punica granatum HOM05D005337 ORTHO05D006567 2.1e-64 251.5 671 84.6
FAN21G3303 Fragaria x ananassa HOM05D005337 ORTHO05D006567 2.7e-64 251.1 397 59.4
Migut.M00881 Erythranthe guttata HOM05D005337 ORTHO05D006567 4.7e-64 250.4 399 56.4
MBI18_g11220_MAGBIO Magnolia biondii HOM05D005337 ORTHO05D006567 1.0e-63 249.2 690 86.2
VMungo0540G1354 Vigna mungo HOM05D005337 ORTHO05D006567 1.4e-63 248.8 704 84.5
Cfa000900 Carpinus fangiana HOM05D005337 ORTHO05D006567 8.8e-63 246.1 763 79.3
PGSC0003DMG400002287 Solanum tuberosum HOM05D005337 ORTHO05D006567 8.8e-63 246.1 744 75.1
THA.LOC104820664 Tarenaya hassleriana HOM05D005337 ORTHO05D006567 8.8e-63 246.1 721 80.2
Phvul.006G168127 Phaseolus vulgaris HOM05D005337 ORTHO05D006567 9.7e-62 242.7 393 65.9
Duzib235G0011 Durio zibethinus HOM05D005337 ORTHO05D006567 2.2e-61 241.5 732 81.4
arahy.Tifrunner.gnm1.ann1.RN8PQ8 Arachis hypogaea HOM05D005337 ORTHO05D006567 4.8e-61 240.4 671 84.2
arahy.Tifrunner.gnm1.ann1.WGPX7I Arachis hypogaea HOM05D005337 ORTHO05D006567 4.8e-61 240.4 671 84.2
arahy.Tifrunner.gnm1.ann1.QR7D30 Arachis hypogaea HOM05D005337 ORTHO05D006567 6.3e-61 240.0 671 84.1
TPR.G4722 Trifolium pratense HOM05D005337 ORTHO05D006567 8.2e-61 239.6 702 84.2
Solyc08g023490.4 Solanum lycopersicum HOM05D005337 ORTHO05D006567 4.1e-60 237.3 666 81.5
Cpa.g.sc17.49 Carica papaya HOM05D005337 ORTHO05D006567 1.2e-59 235.7 634 86.9
COL.COLO4_31011 Corchorus olitorius HOM05D005337 ORTHO05D006567 1.6e-59 235.3 716 81.4
Atru.BG.302.p Acer truncatum HOM05D005337 ORTHO05D006567 3.5e-59 234.2 658 79.3
Sopen08g008640 Solanum pennellii HOM05D005337 ORTHO05D006567 1.0e-58 232.6 681 80.0
Haze_05675 Corylus avellana HOM05D005337 ORTHO05D006567 9.4e-57 226.1 303 79.9
Nn3g20334 Nelumbo nucifera HOM05D005337 ORTHO05D006567 2.7e-56 224.6 213 57.7
SalBow8G2351 Salvia bowleyana HOM05D005337 ORTHO05D006567 2.7e-56 224.6 242 50.4
Medtr2g018550 Medicago truncatula HOM05D005337 ORTHO05D006567 4.7e-56 223.8 335 72.5
BraA09t39143Z Brassica rapa HOM05D005337 ORTHO05D006567 1.4e-55 222.2 694 80.4
A09p36160 Brassica napus HOM05D005337 ORTHO05D006567 5.2e-55 220.3 694 80.3
PSO384G4021 Papaver somniferum HOM05D005337 ORTHO05D006567 5.2e-55 220.3 695 79.9
Aa31LG6G5450 Aethionema arabicum HOM05D005337 ORTHO05D006567 8.8e-55 219.5 698 71.3
Aqoxy6G00107 Aquilegia oxysepala HOM05D005337 ORTHO05D006567 4.4e-54 217.2 775 65.0
Hund17688 Selenicereus undatus HOM05D005337 ORTHO05D006567 9.8e-54 216.1 220 55.0
QL07p034390 Quercus lobata HOM05D005337 ORTHO05D006567 1.1e-52 212.6 309 71.2
CANSAT35G0686 Cannabis sativa HOM05D005337 ORTHO05D006567 3.1e-52 211.1 214 51.9
Sc05g0006000 Simmondsia chinensis HOM05D005337 ORTHO05D006567 4.1e-52 210.7 156 69.2
Sp1g26130 Schrenkiella parvula HOM05D005337 ORTHO05D006567 9.1e-52 209.5 809 69.2
Potri.011G082300 Populus trichocarpa HOM05D005337 ORTHO05D006567 2.7e-51 208.0 236 52.1
RcHm_v2.0_Chr3g0490541 Rosa chinensis HOM05D005337 ORTHO05D006567 5.9e-51 206.8 130 74.6
EL10Ac9g22478 Beta vulgaris HOM05D005337 ORTHO05D006567 1.3e-50 205.7 206 51.9
AUR62017465 Chenopodium quinoa HOM05D005337 ORTHO05D006567 2.2e-50 204.9 157 63.1
ATR1098G077 Amborella trichopoda HOM05D005337 ORTHO05D006567 8.5e-50 203.0 721 77.5
CDE02G1473 Ceratophyllum demersum HOM05D005337 ORTHO05D006567 2.5e-49 201.4 310 73.5
Carub.0001s2852 Capsella rubella HOM05D005337 ORTHO05D006567 3.2e-49 201.1 729 76.7
AUR62025016 Chenopodium quinoa HOM05D005337 ORTHO05D006567 3.2e-49 201.1 157 62.4
AT1G30290 Arabidopsis thaliana HOM05D005337 ORTHO05D006567 9.5e-49 199.5 155 66.5
AL1G44240 Arabidopsis lyrata HOM05D005337 ORTHO05D006567 1.2e-48 199.1 260 48.8
Thhalv10006807m.g Eutrema salsugineum HOM05D005337 ORTHO05D006567 1.2e-48 199.1 139 70.5
Ah.01g015050 Amaranthus hybridus HOM05D005337 ORTHO05D006567 6.1e-48 196.8 213 50.7
BcaB07g32639 Brassica carinata HOM05D005337 ORTHO05D006567 1.0e-47 196.1 131 72.5
CARHR029680 Cardamine hirsuta HOM05D005337 ORTHO05D006567 1.8e-47 195.3 167 62.3
BcaC05g27061 Brassica carinata HOM05D005337 ORTHO05D006567 2.3e-47 194.9 139 71.2
BolC5t31652H Brassica oleracea HOM05D005337 ORTHO05D006567 2.3e-47 194.9 139 71.2
C05p29200 Brassica napus HOM05D005337 ORTHO05D006567 3.0e-47 194.5 139 71.2
HanXRQChr04g0116581 Helianthus annuus HOM05D005337 ORTHO05D006567 6.8e-47 193.4 288 77.1
BcaC05g27058 Brassica carinata HOM05D005337 ORTHO05D006567 2.0e-46 191.8 128 72.7
BolC5t31647H Brassica oleracea HOM05D005337 ORTHO05D006567 2.0e-46 191.8 128 72.7
C05p29160 Brassica napus HOM05D005337 ORTHO05D006567 1.7e-45 188.7 128 71.9
SGA_v2.0_scaffold223G42824 Striga asiatica HOM05D005337 ORTHO05D006567 6.3e-45 186.8 135 64.4
Sabra11G0065300 Salix brachista HOM05D005337 ORTHO05D006567 9.2e-44 183.0 126 70.6
CDE05G0694 Ceratophyllum demersum HOM05D005337 ORTHO05D006567 1.6e-43 182.2 178 53.9
Rhsim13G0117400 Rhododendron simsii HOM05D005337 ORTHO05D006567 7.7e-43 179.9 676 61.7
HPP92_001622 Vanilla planifolia HOM05D005337 ORTHO05D006567 2.8e-40 171.4 167 55.7
Lsat_1_v5_gn_7_27480 Lactuca sativa HOM05D005337 ORTHO05D006567 4.7e-40 170.6 192 51.0
Oeu032720.1 Olea europaea HOM05D005337 ORTHO05D006567 1.4e-39 169.1 223 46.6
SHI24905 Sapria himalayana HOM05D005337 ORTHO05D006567 3.0e-39 167.9 189 48.1
RcHm_v2.0_Chr5g0014911 Rosa chinensis HOM05D005337 ORTHO05D006567 3.2e-36 157.9 118 64.4
Os12g0615600 Oryza sativa ssp. japonica HOM05D005337 ORTHO05D006567 4.1e-36 157.5 294 60.2
RcHm_v2.0_Chr3g0490551 Rosa chinensis HOM05D005337 ORTHO05D006567 7.8e-35 153.3 118 62.7
Nitab4.5_0000258g0100 Nicotiana tabacum HOM05D005337 ORTHO05D006567 1.0e-34 152.9 296 60.1
Zm00001eb134800 Zea mays HOM05D005337 ORTHO05D006567 8.6e-34 149.8 281 60.9
TAR624G0810 Trochodendron aralioides HOM05D005337 ORTHO05D006567 1.5e-33 149.1 110 81.8
CAN.G36.12 Capsicum annuum HOM05D005337 ORTHO05D006567 5.2e-31 140.6 107 65.4
FAN21G0118 Fragaria x ananassa HOM05D005337 ORTHO05D006567 2.6e-30 138.3 103 65.0
ECA236G3236 Erigeron canadensis HOM05D005337 ORTHO05D006567 2.2e-29 135.2 111 60.4
A09p36200 Brassica napus HOM05D005337 ORTHO05D006567 2.4e-28 131.7 109 61.5
Ca_00508_v3 Cicer arietinum L. HOM05D005337 ORTHO05D006567 4.6e-27 127.5 105 74.3
BolC5t31646H Brassica oleracea HOM05D005337 ORTHO05D006567 6.0e-27 127.1 109 71.6
Lalb_Chr15g0086601 Lupinus albus HOM05D005337 ORTHO05D006567 2.3e-26 125.2 77 76.6
Atru.chr10.1089 Acer truncatum HOM05D005337 ORTHO05D006567 1.9e-25 122.1 119 66.4
unitig_37.g12089 Utricularia gibba HOM05D005337 ORTHO05D006567 4.3e-25 120.9 106 57.5
SEGI_37079 Sequoiadendron giganteum HOM05D005337 ORTHO05D006567 6.8e-23 113.6 109 50.5
Sc05g0005990 Simmondsia chinensis HOM05D005337 ORTHO05D006567 2.0e-22 112.1 83 63.9
BraA09t39145Z Brassica rapa HOM05D005337 ORTHO05D006567 3.0e-18 98.2 86 75.6
arahy.Tifrunner.gnm1.ann1.1U5Z8B Arachis hypogaea HOM05D005337 ORTHO05D006567 2.1e-16 92.0 72 61.1
Ca_18255_v3 Cicer arietinum L. HOM05D000068 ORTHO05D006567 2.1e-16 92.0 89 50.6
arahy.Tifrunner.gnm1.ann1.W21Z3V Arachis hypogaea HOM05D005337 ORTHO05D006567 2.3e-15 88.6 134 40.3
SEGI_28981 Sequoiadendron giganteum HOM05D005337 ORTHO05D006567 2.3e-15 88.6 96 50.0
arahy.Tifrunner.gnm1.ann1.S6HMEC Arachis hypogaea HOM05D005337 ORTHO05D006567 3.8e-13 81.3 76 52.6
Actinidia07466 Actinidia chinensis HOM05D005337 ORTHO05D006567 1.4e-12 79.3 45 82.2
Medtr2g018580 Medicago truncatula HOM05D005337 ORTHO05D006567 2.1e-11 75.5 59 61.0
MD05G1279600 Malus domestica HOM05D005337 ORTHO05D006567 3.5e-11 74.7 50 72.0
Peaxi162Scf00046g00155 Petunia axillaris HOM05D006740 ORTHO05D008571 1.9e-09 68.9 117 29.9
AagrBONN_evm.TU.Sc2ySwM_344.1991 Anthoceros agrestis HOM05D004079 ORTHO05D008352 2.1e-08 65.5 109 31.2
Lj2C113T11 Lonicera japonica HOM05D006740 ORTHO05D008571 2.4e-07 62.0 116 25.9
Aqoxy2G00263 Aquilegia oxysepala HOM05D005973 ORTHO05D007285 3.1e-07 61.6 115 31.3
DCAR_017698 Daucus carota HOM05D006740 ORTHO05D008571 6.9e-07 60.5 116 25.0
SEGI_16657 Sequoiadendron giganteum HOM05D005337 ORTHO05D023551 1.5e-06 59.3 118 27.1
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 2.0e-06 58.9 96 33.3
TWI15G0380 Tripterygium wilfordii HOM05D004079 ORTHO05D005437 2.0e-06 58.9 115 32.2
TAR623G1644 Trochodendron aralioides HOM05D005973 ORTHO05D007285 3.4e-06 58.2 115 30.4
CAN.G999.30 Capsicum annuum HOM05D004079 ORTHO05D005437 4.4e-06 57.8 84 36.9
Gohir.A02G001400 Gossypium hirsutum HOM05D006740 ORTHO05D008571 4.4e-06 57.8 116 25.9
Gorai.005G002200 Gossypium raimondii HOM05D006740 ORTHO05D008571 4.4e-06 57.8 116 25.9
Lj7A578T58 Lonicera japonica HOM05D005973 ORTHO05D007285 5.8e-06 57.4 131 31.3
Gohir.D02G001700 Gossypium hirsutum HOM05D006740 ORTHO05D008571 7.6e-06 57.0 116 25.9
Nn1g00512 Nelumbo nucifera HOM05D006740 ORTHO05D008571 7.6e-06 57.0 128 31.2
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 9.9e-06 56.6 206 25.2
Dinv05038 Davidia involucrata HOM05D005973 ORTHO05D007285 9.9e-06 56.6 100 31.0
SalBow5G5059 Salvia bowleyana HOM05D004079 ORTHO05D005437 9.9e-06 56.6 95 31.6
TAR623G1677 Trochodendron aralioides HOM05D005973 ORTHO05D007285 9.9e-06 56.6 115 29.6
vmacro19755 Vaccinium macrocarpon HOM05D005973 ORTHO05D007285 9.9e-06 56.6 83 37.3


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