Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 6.0e-58 227.3 111 100.0
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.2e-53 213.0 110 95.5
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.3e-52 209.5 110 93.6
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.7e-50 201.8 110 89.1
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.5e-50 201.4 109 91.7
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.9e-48 195.7 109 86.2
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.4e-43 178.7 110 79.1
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 1.5e-37 159.5 110 70.0
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 2.0e-37 159.1 111 70.3
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 7.1e-35 150.6 109 66.1
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.2e-34 149.8 110 69.1
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 1.6e-34 149.4 113 64.6
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 4.6e-34 147.9 111 64.9
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 3.0e-33 145.2 113 63.7
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 5.1e-33 144.4 112 63.4
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 6.7e-33 144.1 110 63.6
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 8.7e-33 143.7 112 63.4
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 1.1e-32 143.3 110 61.8
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.9e-32 142.5 110 62.7
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 2.5e-32 142.1 110 62.7
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 3.3e-32 141.7 112 64.3
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 4.3e-32 141.4 111 60.4
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 5.6e-32 141.0 113 61.1
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 9.6e-32 140.2 110 61.8
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 9.6e-32 140.2 113 61.1
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 9.6e-32 140.2 109 66.1
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.3e-31 139.8 110 60.9
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 1.6e-31 139.4 112 61.6
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 1.6e-31 139.4 113 62.8
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 2.8e-31 138.7 109 60.6
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 2.8e-31 138.7 109 60.6
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 3.7e-31 138.3 109 61.5
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 3.7e-31 138.3 113 62.8
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 3.7e-31 138.3 109 62.4
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 3.7e-31 138.3 112 63.4
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 3.7e-31 138.3 113 62.8
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 3.7e-31 138.3 111 65.8
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 4.8e-31 137.9 110 60.9
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 8.1e-31 137.1 109 59.6
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 1.1e-30 136.7 109 59.6
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 1.1e-30 136.7 109 59.6
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.8e-30 136.0 109 59.6
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 1.8e-30 136.0 109 63.3
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 2.4e-30 135.6 113 62.8
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 4.0e-30 134.8 110 58.2
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 5.3e-30 134.4 112 60.7
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 9.0e-30 133.7 112 61.6
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 1.5e-29 132.9 112 59.8
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 3.4e-29 131.7 111 60.4
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.4e-29 131.7 113 59.3
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 5.8e-29 131.0 113 59.3
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 5.8e-29 131.0 110 61.8
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 7.6e-29 130.6 111 57.7
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 7.6e-29 130.6 113 57.5
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 7.6e-29 130.6 110 60.0
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 9.9e-29 130.2 112 57.1
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.3e-28 129.8 110 60.0
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.7e-28 129.4 109 58.7
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.7e-28 129.4 109 58.7
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.7e-28 129.4 109 58.7
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.7e-28 129.4 109 58.7
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.9e-28 128.6 95 65.3
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.8e-28 128.3 113 58.4
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 3.8e-28 128.3 113 58.4
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 3.8e-28 128.3 110 54.5
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 4.9e-28 127.9 111 56.8
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 8.4e-28 127.1 109 57.8
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 8.4e-28 127.1 109 57.8
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 8.4e-28 127.1 112 53.6
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 8.4e-28 127.1 112 53.6
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 8.4e-28 127.1 112 57.1
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 2.4e-27 125.6 110 59.1
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 2.4e-27 125.6 109 53.2
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 3.2e-27 125.2 111 55.9
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 3.2e-27 125.2 109 56.9
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 7.1e-27 124.0 112 54.5
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 9.3e-27 123.6 109 56.9
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 2.1e-26 122.5 113 51.3
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 3.5e-26 121.7 110 56.4
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 4.6e-26 121.3 110 54.5
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 4.6e-26 121.3 110 54.5
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 6.0e-26 120.9 113 56.6
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 7.9e-26 120.6 109 55.0
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 7.9e-26 120.6 110 54.5
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.0e-25 120.2 110 57.3
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 1.0e-25 120.2 111 55.9
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.3e-25 119.8 106 57.5
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.3e-25 119.8 110 55.5
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 1.8e-25 119.4 110 56.4
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 1.8e-25 119.4 108 56.5
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 1.8e-25 119.4 110 57.3
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 2.3e-25 119.0 93 62.4
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 3.9e-25 118.2 109 54.1
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 5.1e-25 117.9 110 55.5
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 5.1e-25 117.9 110 55.5
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 6.7e-25 117.5 107 55.1
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 8.7e-25 117.1 110 52.7
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 1.9e-24 115.9 109 54.1
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 5.6e-24 114.4 110 53.6
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 9.6e-24 113.6 108 51.9
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 9.6e-24 113.6 108 51.9
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 1.6e-23 112.8 110 51.8
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 1.6e-23 112.8 109 53.2
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 1.6e-23 112.8 111 51.4
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 4.0e-22 108.2 110 51.8
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 5.3e-22 107.8 106 53.8
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.5e-21 106.3 111 50.5
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 2.0e-21 105.9 111 52.3
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 2.6e-21 105.5 109 51.4
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 2.6e-21 105.5 107 52.3
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 4.5e-21 104.8 106 50.0
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 2.9e-20 102.1 112 45.5
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 7.1e-19 97.4 89 53.9
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 7.1e-19 97.4 108 47.2
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 3.0e-17 92.0 117 46.2
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 1.5e-16 89.7 110 49.1
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 7.4e-16 87.4 81 59.3
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 3.7e-15 85.1 78 56.4
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 1.4e-14 83.2 106 48.1
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 5.3e-14 81.3 111 44.1
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 2.2e-12 75.9 115 35.7
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 8.5e-12 73.9 86 45.3
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 1.1e-11 73.6 81 49.4
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 3.2e-11 72.0 114 35.1
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 1.6e-10 69.7 81 46.9
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 3.3e-08 62.0 51 54.9


User provided reference genes

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