Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.2e-44 181.4 95 100.0
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.3e-42 175.3 95 95.8
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.9e-42 174.5 95 95.8
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 9.7e-41 169.9 95 92.6
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.2e-29 132.1 77 90.9
CSS0017526 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D111394 3.2e-20 101.7 77 76.6
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.7e-14 82.0 52 80.8
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 1.7e-13 79.3 53 79.2
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 1.1e-12 76.6 52 78.8
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 1.5e-12 76.3 52 78.8
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 4.7e-11 71.2 55 65.5
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 1.4e-10 69.7 52 71.2
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 1.8e-10 69.3 54 70.4
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 2.3e-10 68.9 55 69.1
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 4.0e-10 68.2 54 70.4
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 5.2e-10 67.8 52 69.2
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 6.8e-10 67.4 52 65.4
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 8.8e-10 67.0 71 54.9
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 2.0e-09 65.9 52 65.4
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.6e-09 65.5 35 94.3
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 2.6e-09 65.5 52 69.2
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 2.6e-09 65.5 52 65.4
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 3.4e-09 65.1 52 63.5
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 3.4e-09 65.1 54 68.5
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 7.5e-09 63.9 50 66.0
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 2.8e-08 62.0 52 65.4
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.9e-08 61.2 42 76.2
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 4.9e-08 61.2 52 61.5
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 4.9e-08 61.2 52 59.6
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 1.1e-07 60.1 50 60.0
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 1.1e-07 60.1 48 62.5
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 1.8e-07 59.3 52 57.7
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 2.4e-07 58.9 50 60.0
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 3.1e-07 58.5 52 57.7
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 4.1e-07 58.2 68 51.5
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 4.1e-07 58.2 54 61.1
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 4.1e-07 58.2 43 67.4
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 5.4e-07 57.8 52 59.6
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 5.4e-07 57.8 52 59.6
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 5.4e-07 57.8 43 67.4
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 5.4e-07 57.8 52 57.7
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 7.0e-07 57.4 55 58.2
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 7.0e-07 57.4 53 58.5
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 9.2e-07 57.0 52 57.7
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 1.2e-06 56.6 50 58.0
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 1.6e-06 56.2 49 63.3
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 4.5e-06 54.7 49 57.1


User provided reference genes

Program Settings