Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.8e-82 308.1 157 100.0
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.9e-64 247.3 150 87.3
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.1e-61 239.2 162 80.2
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.7e-58 229.6 150 82.7
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.9e-48 194.1 150 72.0
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.7e-46 188.0 131 77.1
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.4e-41 173.3 150 60.7
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 4.7e-40 168.3 150 63.3
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.4e-39 166.8 150 62.7
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.3e-39 166.0 150 62.0
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 3.0e-39 165.6 150 62.0
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 5.2e-39 164.9 153 63.4
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 8.8e-39 164.1 151 59.6
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.6e-38 162.5 183 56.3
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.3e-38 162.2 151 59.6
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 7.4e-38 161.0 151 60.9
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.7e-38 160.6 150 59.3
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 9.7e-38 160.6 150 56.7
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 2.2e-37 159.5 151 60.3
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.8e-37 159.1 108 82.4
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.8e-37 159.1 108 82.4
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 2.8e-37 159.1 152 61.8
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 3.7e-37 158.7 151 59.6
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 3.7e-37 158.7 151 61.6
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 3.7e-37 158.7 155 60.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 6.3e-37 157.9 152 59.2
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.4e-36 156.8 152 56.6
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.1e-36 155.6 152 58.6
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.1e-36 155.6 150 56.0
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 5.3e-36 154.8 150 56.0
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 7.0e-36 154.5 150 56.7
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 7.0e-36 154.5 152 60.5
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 7.0e-36 154.5 153 60.1
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 9.1e-36 154.1 150 56.7
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.1e-36 154.1 152 58.6
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-35 153.7 152 57.9
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.6e-35 153.3 155 58.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.6e-35 153.3 154 54.5
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.0e-35 152.9 151 59.6
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 2.0e-35 152.9 151 59.6
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.6e-35 152.5 152 55.9
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 2.6e-35 152.5 151 58.3
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 2.6e-35 152.5 155 56.1
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 3.5e-35 152.1 150 55.3
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.5e-35 151.8 151 58.3
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 5.9e-35 151.4 150 58.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.3e-34 150.2 150 53.3
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.3e-34 150.2 150 56.0
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 3.8e-34 148.7 152 55.9
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 5.0e-34 148.3 151 58.3
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 5.0e-34 148.3 154 55.8
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 8.5e-34 147.5 150 52.7
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 8.5e-34 147.5 153 53.6
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 8.5e-34 147.5 153 56.9
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-33 146.7 150 52.7
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.9e-33 146.4 152 54.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 5.5e-33 144.8 152 54.6
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 7.2e-33 144.4 150 53.3
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 9.4e-33 144.1 158 50.6
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 9.4e-33 144.1 150 55.3
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.2e-32 143.7 153 52.9
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.6e-32 143.3 152 54.6
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 2.1e-32 142.9 154 52.6
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 2.1e-32 142.9 154 52.6
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 2.1e-32 142.9 151 55.0
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 2.7e-32 142.5 153 52.3
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.7e-32 142.5 154 51.9
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 3.6e-32 142.1 155 52.3
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 3.6e-32 142.1 153 52.9
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 4.7e-32 141.7 151 55.0
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 8.0e-32 141.0 155 51.6
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 8.0e-32 141.0 153 52.9
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 8.0e-32 141.0 152 54.6
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.4e-31 140.2 154 51.9
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 2.3e-31 139.4 146 52.7
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.3e-30 135.6 151 53.6
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 4.4e-30 135.2 151 53.6
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 9.7e-30 134.0 151 53.0
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.8e-29 132.5 154 53.9
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 8.2e-29 131.0 149 51.7
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.4e-28 130.2 143 54.5
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.7e-27 125.9 154 51.3
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 5.9e-27 124.8 139 56.1
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 6.5e-26 121.3 150 46.7
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.9e-25 119.8 171 45.0
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 4.2e-25 118.6 150 52.0
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 2.7e-24 115.9 127 51.2
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.6e-24 115.5 159 44.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 4.0e-23 112.1 144 50.0
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.2e-22 110.5 131 48.1
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.5e-22 110.2 150 48.0
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.4e-22 109.0 149 45.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.4e-22 109.0 150 45.3
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 4.4e-22 108.6 153 46.4
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 5.7e-22 108.2 151 43.7
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 5.7e-22 108.2 151 46.4
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-21 106.7 150 45.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 2.2e-21 106.3 151 45.0
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.1e-20 104.0 108 61.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 4.1e-20 102.1 155 42.6
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 9.1e-20 100.9 154 39.6
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.2e-19 100.5 93 60.2
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.9e-18 95.9 149 44.3
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.1e-17 94.0 92 52.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.0e-15 87.4 87 51.7
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.2e-14 84.0 150 41.3
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 3.4e-14 82.4 164 36.0
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.1e-09 67.4 176 31.2
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 2.8e-08 62.8 126 38.1
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.0e-07 60.8 62 56.5
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-07 59.7 89 36.0
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 6.8e-07 58.2 79 41.8
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 6.8e-07 58.2 109 38.5
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.0e-06 56.6 57 52.6
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 7.5e-06 54.7 57 54.4


User provided reference genes

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