Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 4.3e-46 187.6 91 100.0
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.3e-44 180.6 91 96.7
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 1.1e-38 162.9 83 94.0
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 1.1e-36 156.4 83 90.4
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 1.4e-36 156.0 83 91.6
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.1e-36 154.8 83 89.2
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 9.0e-36 153.3 79 92.4
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.2e-35 152.9 85 84.7
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 1.5e-35 152.5 83 86.7
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 2.0e-35 152.1 83 88.0
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 2.0e-35 152.1 83 88.0
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 2.6e-35 151.8 83 88.0
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 2.6e-35 151.8 83 88.0
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 4.5e-35 151.0 80 87.5
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 7.6e-35 150.2 83 85.5
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 7.6e-35 150.2 80 90.0
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 7.6e-35 150.2 83 86.7
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 9.9e-35 149.8 83 85.5
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 9.9e-35 149.8 81 87.7
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 1.7e-34 149.1 80 85.0
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 1.7e-34 149.1 84 85.7
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 1.7e-34 149.1 79 87.3
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 2.2e-34 148.7 83 86.7
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 2.2e-34 148.7 83 85.5
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 2.9e-34 148.3 77 90.9
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 4.9e-34 147.5 83 84.3
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 6.4e-34 147.1 83 84.3
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 8.4e-34 146.7 83 85.5
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 1.1e-33 146.4 77 90.9
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 1.1e-33 146.4 79 86.1
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 1.1e-33 146.4 79 86.1
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.1e-33 146.4 79 87.3
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.9e-33 145.6 79 87.3
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 1.9e-33 145.6 79 87.3
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 2.4e-33 145.2 79 87.3
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 2.4e-33 145.2 83 84.3
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 3.2e-33 144.8 74 90.5
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 4.2e-33 144.4 79 86.1
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 5.5e-33 144.1 79 86.1
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 5.5e-33 144.1 80 86.2
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 5.5e-33 144.1 80 86.2
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.3e-33 143.3 72 91.7
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.3e-33 143.3 72 91.7
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.3e-33 143.3 72 91.7
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 2.7e-32 141.7 74 89.2
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 2.7e-32 141.7 76 86.8
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 3.5e-32 141.4 75 88.0
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.5e-32 141.4 72 90.3
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.5e-32 141.4 79 84.8
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 3.5e-32 141.4 77 88.3
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 4.6e-32 141.0 72 91.7
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 6.0e-32 140.6 83 80.7
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 6.0e-32 140.6 79 82.3
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 7.9e-32 140.2 82 79.3
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 1.0e-31 139.8 72 90.3
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 1.3e-31 139.4 79 83.5
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.3e-31 139.4 80 82.5
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 1.8e-31 139.0 83 80.7
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.8e-31 139.0 83 81.9
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 1.8e-31 139.0 79 82.3
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 3.0e-31 138.3 75 86.7
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 3.9e-31 137.9 71 90.1
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 3.9e-31 137.9 83 79.5
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 5.1e-31 137.5 83 80.7
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 5.1e-31 137.5 69 94.2
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 5.1e-31 137.5 76 88.2
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 5.1e-31 137.5 83 80.7
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 6.7e-31 137.1 83 81.9
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 6.7e-31 137.1 71 90.1
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 6.7e-31 137.1 71 90.1
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 8.7e-31 136.7 81 79.0
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 8.7e-31 136.7 81 79.0
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.1e-30 136.3 71 90.1
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 1.1e-30 136.3 83 80.7
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 1.9e-30 135.6 83 79.5
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 1.9e-30 135.6 83 79.5
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 1.9e-30 135.6 66 97.0
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 2.5e-30 135.2 83 80.7
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 3.3e-30 134.8 68 92.6
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 5.6e-30 134.0 81 77.8
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 5.6e-30 134.0 71 87.3
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 5.6e-30 134.0 71 87.3
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 5.6e-30 134.0 80 80.0
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 7.4e-30 133.7 83 79.5
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 1.3e-29 132.9 83 78.3
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 2.1e-29 132.1 75 84.0
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.1e-29 132.1 72 86.1
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 2.8e-29 131.7 81 77.8
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 3.7e-29 131.3 66 92.4
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 3.7e-29 131.3 66 92.4
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 1.8e-28 129.0 75 80.0
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 3.1e-28 128.3 75 82.7
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 4.0e-28 127.9 72 83.3
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 2.0e-27 125.6 64 89.1
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 3.4e-27 124.8 79 77.2
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 2.9e-26 121.7 74 75.7
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 2.1e-24 115.5 75 74.7
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 6.0e-24 114.0 66 78.8
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 2.3e-23 112.1 71 71.8
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.2e-19 99.8 65 70.8
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 5.0e-18 94.4 65 66.2
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 2.4e-12 75.5 48 70.8
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 1.3e-10 69.7 62 48.4
FAN14G2601 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.6e-06 55.5 72 45.8
FAN14G5547 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.6e-06 55.5 72 45.8


User provided reference genes

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