Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 2.9e-134 481.9 240 100.0
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 4.2e-133 478.0 240 99.2
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 2.8e-121 438.7 240 89.2
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 3.5e-119 431.8 240 87.9
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 3.5e-119 431.8 240 87.9
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 7.2e-117 424.1 240 85.8
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.2e-116 423.3 239 85.4
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 8.8e-115 417.2 240 82.9
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 3.3e-114 415.2 239 82.4
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 3.7e-113 411.8 240 83.3
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 1.1e-112 410.2 240 81.7
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 1.4e-112 409.8 240 81.2
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.8e-112 409.5 240 81.7
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 2.4e-112 409.1 240 82.9
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 4.1e-112 408.3 240 80.8
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 4.1e-112 408.3 238 81.9
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 5.3e-112 407.9 240 80.8
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 9.1e-112 407.1 250 80.4
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 2.7e-111 405.6 240 80.0
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.7e-111 405.6 240 81.2
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 1.3e-110 403.3 240 80.8
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 1.7e-110 402.9 240 81.2
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 5.0e-110 401.4 240 80.4
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 5.0e-110 401.4 240 80.4
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 1.1e-109 400.2 241 81.3
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 1.1e-109 400.2 240 80.8
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.1e-109 400.2 240 81.2
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.5e-109 399.8 240 79.6
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 1.5e-109 399.8 241 80.9
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.5e-109 399.8 240 79.6
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 1.5e-109 399.8 240 80.8
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.9e-109 399.4 237 81.4
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 1.9e-109 399.4 240 80.0
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 1.9e-109 399.4 238 81.1
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 2.5e-109 399.1 241 80.9
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 3.2e-109 398.7 238 79.8
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 4.2e-109 398.3 240 78.8
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 4.2e-109 398.3 240 80.4
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 5.5e-109 397.9 240 79.6
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 7.2e-109 397.5 240 80.4
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 7.2e-109 397.5 249 78.7
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 9.4e-109 397.1 240 79.2
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 9.4e-109 397.1 240 79.6
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 9.4e-109 397.1 240 79.6
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.2e-108 396.7 241 80.5
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 1.2e-108 396.7 240 79.6
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.2e-108 396.7 240 80.0
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 1.6e-108 396.4 240 78.8
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 2.1e-108 396.0 240 79.2
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 2.1e-108 396.0 241 80.5
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 2.1e-108 396.0 240 79.6
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 2.1e-108 396.0 239 79.5
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 4.7e-108 394.8 240 79.2
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 1.0e-107 393.7 240 77.5
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.4e-107 393.3 240 79.6
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 1.4e-107 393.3 240 78.8
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 2.3e-107 392.5 240 79.2
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 2.3e-107 392.5 240 77.5
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 3.0e-107 392.1 240 79.6
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 5.2e-107 391.3 240 78.3
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 1.2e-106 390.2 240 77.1
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 1.2e-106 390.2 238 79.8
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 1.5e-106 389.8 243 79.4
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 1.5e-106 389.8 240 76.7
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 2.0e-106 389.4 240 77.1
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 2.6e-106 389.0 238 79.4
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 3.4e-106 388.7 240 77.1
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 5.7e-106 387.9 348 61.8
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 2.2e-105 386.0 238 78.2
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 6.3e-105 384.4 240 79.2
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 1.1e-104 383.6 240 77.9
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.4e-104 383.3 238 76.5
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.4e-104 382.5 282 69.1
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 2.4e-104 382.5 238 77.3
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 5.4e-104 381.3 262 71.4
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 1.2e-103 380.2 240 74.2
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 1.2e-103 380.2 240 76.2
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.6e-103 379.8 253 73.5
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 4.5e-103 378.3 238 74.8
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 7.7e-103 377.5 237 74.3
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 7.7e-103 377.5 240 75.8
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.7e-102 376.3 240 78.3
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 6.5e-102 374.4 267 73.4
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 1.8e-99 366.3 240 76.2
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 6.8e-99 364.4 247 74.9
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 7.0e-96 354.4 200 85.0
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.2e-95 353.6 201 85.1
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 3.5e-95 352.1 238 71.0
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 1.7e-94 349.7 206 81.6
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 5.2e-91 338.2 240 68.8
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 6.8e-91 337.8 240 67.9
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 3.4e-90 335.5 203 79.8
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 9.8e-90 334.0 200 80.5
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 1.1e-88 330.5 200 78.5
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 3.2e-88 328.9 200 80.5
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 3.9e-86 322.0 200 76.5
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.9e-85 319.7 240 69.2
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 7.3e-85 317.8 194 77.3
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 2.3e-83 312.8 238 61.3
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 2.2e-73 279.6 158 81.6
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 4.0e-67 258.8 147 81.0
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 1.7e-65 253.4 239 54.4
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 3.2e-56 222.6 133 78.9
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.2e-55 220.7 131 77.9
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.6e-52 210.3 140 66.4
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 2.1e-47 193.4 132 71.2
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 7.9e-39 164.9 99 75.8
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 6.2e-36 155.2 233 38.2
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 5.8e-34 148.7 104 64.4
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 2.2e-33 146.7 245 35.5
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 3.6e-23 112.8 69 76.8
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.7e-15 86.7 91 51.6
RcHm_v2.0_Chr4g0405021 Rosa chinensis HOM05D000306 ORTHO05D030075 2.7e-15 86.7 59 72.9
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 3.0e-14 83.2 174 35.1
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 5.1e-14 82.4 158 32.9
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 8.8e-14 81.6 148 35.1
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 3.3e-13 79.7 60 71.7
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.4e-11 74.3 41 80.5
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.5e-10 70.9 39 84.6
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 2.0e-10 70.5 144 29.2
TPR.G20440 Trifolium pratense HOM05D000306 ORTHO05D050985 6.5e-09 65.5 41 78.0
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 1.6e-07 60.8 41 70.7
SEGI_29302 Sequoiadendron giganteum HOM05D000306 ORTHO05D050985 2.1e-07 60.5 41 70.7
PGR102G2366 Punica granatum HOM05D003206 ORTHO05D005207 1.4e-06 57.8 155 26.5
ATR0767G098 Amborella trichopoda HOM05D003206 ORTHO05D005207 6.7e-06 55.5 203 22.7
Pp3c5_10000 Physcomitrium patens HOM05D003206 ORTHO05D005207 6.7e-06 55.5 126 26.2
DCAR_016275 Daucus carota HOM05D003206 ORTHO05D005207 8.8e-06 55.1 124 26.6


User provided reference genes

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