Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008876 Camellia sinensis var. sinensis HOM05D003436 ORTHO05D003674 5.5e-72 274.2 143 100.0
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 1.3e-12 77.0 107 49.5
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 9.2e-11 70.9 111 45.9
Hma1.2p1_0386F.1_g141820 Hydrangea macrophylla HOM05D003436 ORTHO05D003674 9.2e-11 70.9 109 45.0
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 3.5e-10 68.9 110 46.4
Rhsim03G0006300 Rhododendron simsii HOM05D003436 ORTHO05D003674 6.0e-10 68.2 145 40.7
Actinidia32390 Actinidia chinensis HOM05D003436 ORTHO05D003674 1.7e-09 66.6 90 54.4
vmacro07911 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 2.3e-09 66.2 136 40.4
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 3.0e-09 65.9 117 46.2
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 3.0e-09 65.9 120 44.2
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 8.6e-09 64.3 110 45.5
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 1.1e-08 63.9 121 43.0
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 3.3e-08 62.4 116 40.5
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 4.3e-08 62.0 121 43.8
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 7.3e-08 61.2 122 36.9
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 7.3e-08 61.2 127 41.7
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 9.5e-08 60.8 120 44.2
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 1.6e-07 60.1 82 52.4
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 1.6e-07 60.1 129 41.1
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 2.8e-07 59.3 126 40.5
vmacro07912 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 2.8e-07 59.3 133 39.1
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 3.6e-07 58.9 117 41.0
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 3.6e-07 58.9 126 41.3
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 3.6e-07 58.9 121 39.7
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 6.2e-07 58.2 130 38.5
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 8.1e-07 57.8 122 40.2
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 1.1e-06 57.4 121 39.7
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 1.4e-06 57.0 94 40.4
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.4e-06 57.0 126 39.7
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 1.8e-06 56.6 83 48.2
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 2.4e-06 56.2 123 39.8
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 3.1e-06 55.8 110 43.6
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 4.0e-06 55.5 126 38.1
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 4.0e-06 55.5 122 41.8
Dinv24076 Davidia involucrata HOM05D003436 ORTHO05D003674 5.2e-06 55.1 114 47.4
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 6.8e-06 54.7 117 39.3
Lj5g0013312 Lotus japonicus HOM05D003436 ORTHO05D003674 8.9e-06 54.3 114 38.6
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 8.9e-06 54.3 126 38.9
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 8.9e-06 54.3 108 40.7


User provided reference genes

Program Settings