Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.2e-248 861.3 433 100.0
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.8e-203 712.6 356 99.4
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.0e-202 709.1 423 84.6
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.5e-201 703.7 422 84.4
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 4.1e-195 684.9 423 82.5
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 9.1e-195 683.7 423 82.5
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 2.0e-189 666.0 423 81.3
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.4e-181 638.3 423 76.8
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 5.2e-174 614.8 424 74.1
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 7.5e-173 610.9 423 74.7
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 5.4e-171 604.7 420 72.4
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.1e-168 597.0 317 93.1
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 1.9e-168 596.3 421 72.2
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.2e-167 593.6 421 72.0
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.6e-167 593.2 421 71.7
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.1e-167 592.8 421 72.7
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 6.1e-167 591.3 419 71.1
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.8e-166 589.7 423 70.9
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.8e-166 589.7 447 67.8
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 3.1e-166 589.0 415 72.5
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 5.8e-165 584.7 426 70.9
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 9.8e-165 583.9 423 70.9
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 2.2e-164 582.8 418 70.6
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 3.7e-164 582.0 410 72.4
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.4e-163 580.1 423 71.2
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 1.9e-163 579.7 422 69.7
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.4e-163 579.3 434 70.0
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 2.4e-163 579.3 423 70.7
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 1.2e-162 577.0 422 70.1
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.6e-162 576.6 432 69.4
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 5.0e-161 571.6 416 70.9
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 6.6e-161 571.2 423 69.0
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 8.6e-161 570.9 432 68.8
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.5e-160 570.1 421 68.4
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 1.5e-160 570.1 422 68.7
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 3.3e-160 568.9 421 68.9
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 4.7e-159 565.1 417 70.0
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 8.0e-159 564.3 416 70.4
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 1.1e-158 563.9 416 70.4
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.8e-158 563.1 423 66.0
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 5.2e-158 561.6 421 67.5
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 8.9e-158 560.8 419 68.7
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.2e-157 560.5 422 66.6
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 2.6e-157 559.3 422 69.4
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 3.4e-157 558.9 415 68.7
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.4e-157 558.9 420 68.6
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 9.8e-157 557.4 423 65.5
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 9.8e-157 557.4 422 65.9
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.7e-156 556.6 421 67.5
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.1e-155 553.9 405 69.9
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 1.6e-154 550.1 423 64.8
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 2.1e-154 549.7 422 65.4
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.5e-154 548.9 422 67.8
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.5e-152 543.5 430 64.0
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.9e-152 543.1 422 66.8
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.3e-152 542.3 422 67.1
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.3e-152 542.0 421 66.3
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 4.3e-152 542.0 422 66.6
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 9.5e-152 540.8 422 66.8
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 1.2e-151 540.4 423 64.8
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 6.2e-151 538.1 407 68.3
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 6.8e-150 534.6 425 64.9
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.0e-149 533.1 437 64.5
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 3.4e-149 532.3 410 68.0
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 4.4e-149 531.9 419 65.9
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 4.4e-149 531.9 419 65.6
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.2e-148 529.6 338 79.3
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.4e-147 526.9 422 64.5
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.4e-147 526.9 421 65.8
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 1.9e-147 526.6 422 64.9
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 2.4e-147 526.2 421 65.1
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 4.1e-147 525.4 429 66.7
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.2e-146 523.9 424 64.2
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 2.1e-146 523.1 425 64.2
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 3.5e-146 522.3 416 65.6
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 4.6e-146 521.9 328 77.4
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.0e-145 520.8 420 65.0
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.1e-144 517.3 416 65.4
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 3.3e-144 515.8 419 63.7
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 5.6e-144 515.0 419 64.9
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 9.5e-144 514.2 419 64.4
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.6e-143 513.5 419 64.4
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.8e-143 512.7 416 63.7
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 4.7e-143 511.9 419 64.2
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 4.7e-143 511.9 359 71.9
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 6.2e-143 511.5 416 63.9
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 8.1e-143 511.1 419 64.4
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 1.1e-142 510.8 396 65.9
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.4e-142 510.4 329 77.5
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 2.4e-142 509.6 419 63.7
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.1e-142 509.2 420 63.8
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 4.0e-142 508.8 419 64.2
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 6.8e-142 508.1 416 63.0
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.6e-138 496.9 426 63.1
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.3e-137 493.8 415 61.7
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 8.1e-135 484.6 365 67.1
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.1e-134 484.2 420 59.8
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 3.8e-132 475.7 426 59.6
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 1.0e-129 467.6 494 54.7
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.0e-129 467.6 405 62.2
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 1.9e-128 463.4 359 65.7
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.8e-126 456.8 416 55.0
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.9e-123 446.8 417 57.6
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 2.4e-123 446.4 385 60.5
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.8e-121 440.3 327 68.2
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 2.2e-116 423.3 324 67.3
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 2.8e-111 406.4 396 54.3
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 4.5e-101 372.5 420 50.7
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.2e-95 353.6 320 56.2
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.7e-87 327.4 314 53.8
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 9.1e-86 321.6 338 50.3
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 6.7e-81 305.4 421 40.1
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.2e-79 300.4 431 41.1
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 5.9e-77 292.4 410 46.6
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 4.0e-73 279.6 405 39.3
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 1.9e-67 260.8 400 37.8
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 6.1e-66 255.8 233 56.2
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 2.4e-62 243.8 213 58.7
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 1.6e-50 204.5 269 49.4
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.1e-42 177.6 124 66.9
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 4.0e-41 173.3 434 29.3
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 3.1e-33 147.1 129 60.5
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 8.9e-33 145.6 153 51.0
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 3.1e-25 120.6 74 81.1
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.2e-24 118.6 418 27.3
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 7.6e-16 89.4 65 73.8
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.3e-11 72.8 81 49.4
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 1.5e-08 65.1 59 66.1


User provided reference genes

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